Gene Ajs_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1066 
Symbol 
ID4670951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand- 
Start bp1119944 
End bp1120555 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content63% 
IMG OID639838185 
Producthypothetical protein 
Protein accessionYP_985377 
Protein GI121593481 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.228926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCC CTTCCCCCCA TTCCGCCCAC ATGGCAAACG CCCCGCTGCG CCCCCTGCCC 
GCCCTGATCT TTGCCAGCCG CTGGCTGCAA CTGCCCCTGT ACCTGGGCCT GATCGCCGCC 
CAGGGCGTCT ATGTCTGGCA TTTCCTGCTG GAACTGTGGC ACCTGGTGGA AGCGGCTTTC 
GGCCACGAGG CCGCGCTGCA GGCGCTCATC ACCAGCATCG GCTACAAGCC GGACGCGCCC 
GTCACCTCGC TCAACGAGAC GGTGATCATG CTGGTGGTGC TGGCGCTGAT CGATGTGGTG 
ATGATCTCCA ACCTGCTCAT CATGGTGATC GTCGGAGGCT ACGAGACCTT CGTGAGCCGC 
CTTGGCCTGG ACCGCCACCC CGACCAGCCC GAGTGGCTGG GCCATGTGAA CGCCTCGGTG 
CTCAAGGTGA AGCTGGGCCT GTCGATCATC GGCATCAGTT CGATCCACCT GCTCAAGACC 
TTCATCAACG CCGCCAACTA CAGCGAGAAG GTGCTGATGT GGCAGACCAT CATCCACGTC 
ACTTTCCTGT TCAGCGCGCT GGCCATCGCA CTCACCGACC GGCTGCTGCA CACCTCCGAG 
GACAAGCACT GA
 
Protein sequence
MTSPSPHSAH MANAPLRPLP ALIFASRWLQ LPLYLGLIAA QGVYVWHFLL ELWHLVEAAF 
GHEAALQALI TSIGYKPDAP VTSLNETVIM LVVLALIDVV MISNLLIMVI VGGYETFVSR 
LGLDRHPDQP EWLGHVNASV LKVKLGLSII GISSIHLLKT FINAANYSEK VLMWQTIIHV 
TFLFSALAIA LTDRLLHTSE DKH