Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1060 |
Symbol | |
ID | 4670795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1112475 |
End bp | 1114007 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639838179 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_985371 |
Protein GI | 121593475 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.680009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCATCCT CGGCGTTTCA CCACGGCCAA GCGGCTCCCC ACTTCATGCA ACTTCCGCGT CTCACCCTCC AAGGCAAGGC CTTTGCAGCC CTGTCGGCGC TGCTGGGGGT GATGCTGGTG CTGTTCGTGG GCTTCTCGCT GCTGGGGCTG CAGCGGGGGC TGGGCCCCTA CGTGGCCGAG GTGGAGTTGG CGCGCATGGA CTGGCTGGTG TTCCGCCTGC AGGCCGCGTA TGAACAGCAG GGCGGCTGGC AGACACTGCG CGAGCAGCCC GGCCTGTGGC GCGAGCTGCG CCGCCCGCGC AACGTTCAGA TGCCGACCTT CGGACCCGCT CCTGTGCCTG CGCCGGAGCC CCTGTTGCTA CCCCAGGTCA CGCCCGGCAC GGCCCCGCCG CCGGTGGATG CGCTTTCGCG GCGCCTGGGC GTGGTGGATA CGCAGGGCCG CGTGGTGGCG GGCGCCGCAC CCGTTGCCGG CGGTGCGCGG ACCGCGCTGC GCGACGGCGA TGGGCGCCTG ATCGGCCACC TGGTGCTGGC GCCGCTTGAC GGGCTGGAGC GCGATGCGGA CCGCGCCTTC CTGTCCAAGC AGCTCGGTTT CGTGGTGTGG AGCGGCGTGA CGGGCCTGGC GCTGGCACTG CTGCTGTCCT GGTGGCTGGC GCGGCGCTGG CTGCGCCCCA TCGACACGCT GGTGACCGGC GCGCAGGCCA TTGCGGCCGG CGAGCTGCAC ACCCGCGTGC CCGAACAGGC CGACAGCGAG GAATTCACCC GCCTGATCCA CACCTTCAAC GCCATGGCCG AGCAGCTTGC GAGCGTCGAG GCCTCGCGCC GCCAGTGGAT CGGGGACACC GCGCATGAAC TGCGCACGCC GCTGGCCGCG ATGCGCGCCG AGATCGAGGC CGTGCAGGAC GGCGTGCGCC CGTTCGACGA GAAGACCGCG CGCCGCCTGC ACCGCCAGGT GATGCGGTTG ATCCAGCTCG TGGGCGATCT GCGCGCCAGC GTGGACATGG CCGGCGACCA ACCCCCGCCC GTCATGAGCG CCGTGCAGCC GCTCGCGCTG CTGCGCGAGG CCATGGCCGG CATGCAGTCG CGCTTCGACC AGACGGGTGT CGCCCTGCAG GCCGCGCCAG ACCTGGCCAC GCTCGCCAAG CAGCCGCTGC AGGTGCACGG CAACGCACAG CAGTTGCACC GCGTGTTCCT GAACCTGCTG GAAAACAGCC TGCGCTACAC CGACCCTGGC GGGCGGCTGC AGGTGTCGGC CAATGTGCAG CGCAATGGCG GCCCGCCGCG CCTCACGCTG CGCCTGGACG ACACGGCGCC CGGCGTGGCG CCGCACGAGC TGCCGCACCT GTTTGAGCGT CTGTACCGTG CCGAGGCCTC GCGCCGCCGC GCCTCGGGCG ACCTGGGCGG CTCGGGCCTG GGCCTGGCCA TCTGCCGCAC CATCGTGCAG GCGCACGGCG GCCAGATCGA AGCCAGCGCC TCGCCGCTGG GCGGTCTGCG CATCACCCTC ACGCTGCCTC TACTGGAGAA CCCCTCGCCA TGA
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Protein sequence | MPSSAFHHGQ AAPHFMQLPR LTLQGKAFAA LSALLGVMLV LFVGFSLLGL QRGLGPYVAE VELARMDWLV FRLQAAYEQQ GGWQTLREQP GLWRELRRPR NVQMPTFGPA PVPAPEPLLL PQVTPGTAPP PVDALSRRLG VVDTQGRVVA GAAPVAGGAR TALRDGDGRL IGHLVLAPLD GLERDADRAF LSKQLGFVVW SGVTGLALAL LLSWWLARRW LRPIDTLVTG AQAIAAGELH TRVPEQADSE EFTRLIHTFN AMAEQLASVE ASRRQWIGDT AHELRTPLAA MRAEIEAVQD GVRPFDEKTA RRLHRQVMRL IQLVGDLRAS VDMAGDQPPP VMSAVQPLAL LREAMAGMQS RFDQTGVALQ AAPDLATLAK QPLQVHGNAQ QLHRVFLNLL ENSLRYTDPG GRLQVSANVQ RNGGPPRLTL RLDDTAPGVA PHELPHLFER LYRAEASRRR ASGDLGGSGL GLAICRTIVQ AHGGQIEASA SPLGGLRITL TLPLLENPSP
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