Gene Ajs_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1060 
Symbol 
ID4670795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1112475 
End bp1114007 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content72% 
IMG OID639838179 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_985371 
Protein GI121593475 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.680009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCATCCT CGGCGTTTCA CCACGGCCAA GCGGCTCCCC ACTTCATGCA ACTTCCGCGT 
CTCACCCTCC AAGGCAAGGC CTTTGCAGCC CTGTCGGCGC TGCTGGGGGT GATGCTGGTG
CTGTTCGTGG GCTTCTCGCT GCTGGGGCTG CAGCGGGGGC TGGGCCCCTA CGTGGCCGAG
GTGGAGTTGG CGCGCATGGA CTGGCTGGTG TTCCGCCTGC AGGCCGCGTA TGAACAGCAG
GGCGGCTGGC AGACACTGCG CGAGCAGCCC GGCCTGTGGC GCGAGCTGCG CCGCCCGCGC
AACGTTCAGA TGCCGACCTT CGGACCCGCT CCTGTGCCTG CGCCGGAGCC CCTGTTGCTA
CCCCAGGTCA CGCCCGGCAC GGCCCCGCCG CCGGTGGATG CGCTTTCGCG GCGCCTGGGC
GTGGTGGATA CGCAGGGCCG CGTGGTGGCG GGCGCCGCAC CCGTTGCCGG CGGTGCGCGG
ACCGCGCTGC GCGACGGCGA TGGGCGCCTG ATCGGCCACC TGGTGCTGGC GCCGCTTGAC
GGGCTGGAGC GCGATGCGGA CCGCGCCTTC CTGTCCAAGC AGCTCGGTTT CGTGGTGTGG
AGCGGCGTGA CGGGCCTGGC GCTGGCACTG CTGCTGTCCT GGTGGCTGGC GCGGCGCTGG
CTGCGCCCCA TCGACACGCT GGTGACCGGC GCGCAGGCCA TTGCGGCCGG CGAGCTGCAC
ACCCGCGTGC CCGAACAGGC CGACAGCGAG GAATTCACCC GCCTGATCCA CACCTTCAAC
GCCATGGCCG AGCAGCTTGC GAGCGTCGAG GCCTCGCGCC GCCAGTGGAT CGGGGACACC
GCGCATGAAC TGCGCACGCC GCTGGCCGCG ATGCGCGCCG AGATCGAGGC CGTGCAGGAC
GGCGTGCGCC CGTTCGACGA GAAGACCGCG CGCCGCCTGC ACCGCCAGGT GATGCGGTTG
ATCCAGCTCG TGGGCGATCT GCGCGCCAGC GTGGACATGG CCGGCGACCA ACCCCCGCCC
GTCATGAGCG CCGTGCAGCC GCTCGCGCTG CTGCGCGAGG CCATGGCCGG CATGCAGTCG
CGCTTCGACC AGACGGGTGT CGCCCTGCAG GCCGCGCCAG ACCTGGCCAC GCTCGCCAAG
CAGCCGCTGC AGGTGCACGG CAACGCACAG CAGTTGCACC GCGTGTTCCT GAACCTGCTG
GAAAACAGCC TGCGCTACAC CGACCCTGGC GGGCGGCTGC AGGTGTCGGC CAATGTGCAG
CGCAATGGCG GCCCGCCGCG CCTCACGCTG CGCCTGGACG ACACGGCGCC CGGCGTGGCG
CCGCACGAGC TGCCGCACCT GTTTGAGCGT CTGTACCGTG CCGAGGCCTC GCGCCGCCGC
GCCTCGGGCG ACCTGGGCGG CTCGGGCCTG GGCCTGGCCA TCTGCCGCAC CATCGTGCAG
GCGCACGGCG GCCAGATCGA AGCCAGCGCC TCGCCGCTGG GCGGTCTGCG CATCACCCTC
ACGCTGCCTC TACTGGAGAA CCCCTCGCCA TGA
 
Protein sequence
MPSSAFHHGQ AAPHFMQLPR LTLQGKAFAA LSALLGVMLV LFVGFSLLGL QRGLGPYVAE 
VELARMDWLV FRLQAAYEQQ GGWQTLREQP GLWRELRRPR NVQMPTFGPA PVPAPEPLLL
PQVTPGTAPP PVDALSRRLG VVDTQGRVVA GAAPVAGGAR TALRDGDGRL IGHLVLAPLD
GLERDADRAF LSKQLGFVVW SGVTGLALAL LLSWWLARRW LRPIDTLVTG AQAIAAGELH
TRVPEQADSE EFTRLIHTFN AMAEQLASVE ASRRQWIGDT AHELRTPLAA MRAEIEAVQD
GVRPFDEKTA RRLHRQVMRL IQLVGDLRAS VDMAGDQPPP VMSAVQPLAL LREAMAGMQS
RFDQTGVALQ AAPDLATLAK QPLQVHGNAQ QLHRVFLNLL ENSLRYTDPG GRLQVSANVQ
RNGGPPRLTL RLDDTAPGVA PHELPHLFER LYRAEASRRR ASGDLGGSGL GLAICRTIVQ
AHGGQIEASA SPLGGLRITL TLPLLENPSP