Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1057 |
Symbol | fumC |
ID | 4670733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1109347 |
End bp | 1110738 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639838176 |
Product | fumarate hydratase |
Protein accession | YP_985368 |
Protein GI | 121593472 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCA GCACCCGTAT CGAACGCGAC ACCTTCGGCC CCATCGAGGT GCCGGCCGAC AGGCTCTGGG GCGCGCAGAC GCAGCGCTCG CTGCAGAACT TCGCCATCTC GGGTGAACGA CAGCCGCAGG AACTCATCCG CGCGCTGGCG CAGGTCAAGC GCGCGTCGGC CCGGGTCAAC CACGCGCTGG GGCTGCTGGG GGCGGACAAG ACGCGCGCCA TCGTCGCCGC GGCCGACGAG GTGCTGCTGG GCCAGCACGA CGACGAGTTC CCGCTGGTGG TCTGGCAGAC CGGCTCGGGC ACGCAGACCA ACATGAACGT CAACGAGGTG CTGGCCAACC GCGCCAGCGA GCTGTTGGGC GGCGAGCGCG GCGAGGCACG GCTGGTACAT CCCAACGACG ACGTGAACAA GAGCCAGTCC AGCAACGACG TGTTCCCCAC CGCCACGCAT GTGGCCGCGG TGCAGGCGCT GGTGCACCGG CTGCTGCCCG CCATGGAGGA GCTGCGCGCC ACCCTGCAGG CCAAGGCCGA GGCGTTCGAC GACATCGTGA AGATCGGCCG CACCCATCTG CAGGATGCGA CGCCGCTCAC GCTGGGGCAG GAGATCTCGG GCTGGGTGGC GCAGCTTGCC CATGGGGAAC GCCACGTGCG CGCGGCGCTG CCGCACCTGT ATGAACTGGC CCTGGGCGGG ACGGCCGTGG GCACGGGCCT GAATGCGCCC GAGGGCTACG CCGAACGTGT GGCGCAGGAG CTGGCCCAGT TCACCGGTCA GCCCTTCGTG ACCTCGCCCA ACAAGTTCGA ATCGCTCGCA TCGCAGGACG CGCTGGTGCA TGCCCACGGC GCGCTGAAGA CGCTGGCGGC CAGCCTCACG AAGATCGCCA ACGACGTGCG GTGGCTGGCC AGCGGCCCGC GCTGCGGCAT CGGCGAGATC ACCATCCCTG AGAACGAGCC CGGCTCGTCC ATCATGCCCG GCAAAGTGAA CCCCACGCAG TGCGAGGCGC TGACCATGCT GTGCGCCCAG GTGCTGGGCA ACGACGTGGC CATCAACATC GGCGGGGCCA GTGGCAACTT CGAGCTGAAC GTGTTCCGCC CGCTGGTGGC GCACAACTTC CTGCAGAGCG TGCGGTTGCT GGCCGACGGC ATGGTGAGCT TCAACGAGCA CTGCGCCGTG GGTATCGAGC CCAACCGCGC GCGCATCGCG GAGCTGGTGG AGCGCTCGCT GATGCTGGTG ACGGCGCTCA CCCCGCACAT CGGCTACGAC AAGGCCGCGG CGATTGCCAA GAAGGCGCAC AAGGAAGGCA GCACGCTGCG CGAGGCCGCG CTGGCGCTGG GCTACGTGAC GCCCGCGCAG TTCGATGAGT GGGTGGTGCC CGCCCGGATG GTGGGGCGCT AG
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Protein sequence | MTSSTRIERD TFGPIEVPAD RLWGAQTQRS LQNFAISGER QPQELIRALA QVKRASARVN HALGLLGADK TRAIVAAADE VLLGQHDDEF PLVVWQTGSG TQTNMNVNEV LANRASELLG GERGEARLVH PNDDVNKSQS SNDVFPTATH VAAVQALVHR LLPAMEELRA TLQAKAEAFD DIVKIGRTHL QDATPLTLGQ EISGWVAQLA HGERHVRAAL PHLYELALGG TAVGTGLNAP EGYAERVAQE LAQFTGQPFV TSPNKFESLA SQDALVHAHG ALKTLAASLT KIANDVRWLA SGPRCGIGEI TIPENEPGSS IMPGKVNPTQ CEALTMLCAQ VLGNDVAINI GGASGNFELN VFRPLVAHNF LQSVRLLADG MVSFNEHCAV GIEPNRARIA ELVERSLMLV TALTPHIGYD KAAAIAKKAH KEGSTLREAA LALGYVTPAQ FDEWVVPARM VGR
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