| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1056 |
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| Symbol | |
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| ID | 4670727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1107589 |
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| End bp | 1109229 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639838175 |
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| Product | fumarase |
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| Protein accession | YP_985367 |
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| Protein GI | 121593471 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTTTGC CCTTGCATCA GGCTCGTGCA AGGTGCAGGG CGATAATCGC GGGCGTTCGT
TTCACAAGAA TCCTCCCCCA CATGACCACG ACCATCCGGT ACAACGACCT TGTGGAGTCC
GTAGCTGCCG CGCTGCAGTA CATCTCCTAC TACCACCCCG CCGACTACAT CCAGCACCTG
GCCCGCGCCT ACGAGCGCGA GCAGAGCCCC GCGGCCAAGG ATGCGATGGC GCAGATCCTC
ACCAACAGCA AGATGAGCGC CACGGGCCAC CGCCCGATCT GCCAGGACAC GGGCATCGTG
AACGTGTTCC TGAAGGTGGG CATGGGCGTG CGCTTCGAGG GCTTTGCCGC CGACCAGAGC
CTGGAGGACG CCATCAACGA AGGCGTGCGC CGCGGCTACA ACCACCCCGA CAACACGCTG
CGCGCGTCGG TCGTCGCCGA CCCGCAGTTC GCTCGCAAGA ACACCAAGGA CAACACACCC
GCCGTCATCA ACGTGCAGAT CGTGCCCGGC GACACGCTGG ACGTGACCGT GGCCGCCAAG
GGCGGCGGCA GCGAGAACAA GTCCAAGATG GTCATGATGA ACCCCAGCGA CAACCTGGTG
GACTGGGTGC TCAAGACCGT GCCCACCATG GGCGCCGGCT GGTGCCCGCC GGGCATGCTG
GGCATCGGCA TCGGCGGTAC GGCGGAAAAG GCCGTGCTGC TGGCCAAGGA AAGCCTGATG
GAAGACCTGG ACATGTACGA GCTGCTGGCC AAGAGCCAGC GCGGCGAGAA GCTGGACCAG
GTCGAAGAGC TGCGCCTGGA GCTGTACGAG AAGGTCAACG CCCTGGGCAT CGGCGCCCAG
GGCCTGGGCG GCTTGGCCAC CGTGCTGGAC GTGAAGATCA AGATGTACCC CACGCACGCG
GCCAGCAAGC CCGTGGCCAT GATCCCCAAC TGCGCGGCCA CGCGCCACGC GCACTTCGTG
ATGGACGGCT CCGGCCCGGT CTACATGGAC CCGCCGAGCC TGGACCTGTG GCCCAAGGTG
GACTGGGCGC CCAACACCGA GACCAGCAAG CGCGTGGACC TCAACACCCT GACCAAGGAA
GAGGTCGCGA GCTGGAAGCC TGGCCAGACG CTGCTGCTGA ACGGCAAGAT GCTCACCGGC
CGCGACGCCG CGCACAAGCG CATCCAGGAC ATGCTGGCCA AGGGTGAGAA GCTGCCCGTG
GACTTCACCA ACCGCGTGAT CTACTACGTG GGCCCCGTGG ACCCGGTGAA GGACGAGGCC
GTGGGCCCCG CCGGCCCCAC CACCGCCACG CGCATGGACA AGTTCACCGA CATGATGCTG
GAGCAGACCG GCCTGATCGC CATGATCGGC AAGGCCGAGC GCGGCCCGGT CGCCATCGAG
TCCATCAAGA ACCACAAGAG CGCCTACCTG ATGGCCGTGG GCGGCGCCGC CTACCTGGTC
AGCAAGGCCA TCAAGAACGC CAAGGTGGTG GGCTTTGCGG ACCTGGGCAT GGAAGCCATC
TATGAGTTCG ACGTGGTGGA CATGCCCGTC ACCGTGGCCG TGGACGCGGG CGGCACCAGC
GCCCACATCA CCGGCCCGGC CGAGTGGCAA AAGAAAATCG CCGCGGGCGA ATACAAGGTC
GTGCCCATGG TGGCCGCCTG A
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| Protein sequence | MLLPLHQARA RCRAIIAGVR FTRILPHMTT TIRYNDLVES VAAALQYISY YHPADYIQHL
ARAYEREQSP AAKDAMAQIL TNSKMSATGH RPICQDTGIV NVFLKVGMGV RFEGFAADQS
LEDAINEGVR RGYNHPDNTL RASVVADPQF ARKNTKDNTP AVINVQIVPG DTLDVTVAAK
GGGSENKSKM VMMNPSDNLV DWVLKTVPTM GAGWCPPGML GIGIGGTAEK AVLLAKESLM
EDLDMYELLA KSQRGEKLDQ VEELRLELYE KVNALGIGAQ GLGGLATVLD VKIKMYPTHA
ASKPVAMIPN CAATRHAHFV MDGSGPVYMD PPSLDLWPKV DWAPNTETSK RVDLNTLTKE
EVASWKPGQT LLLNGKMLTG RDAAHKRIQD MLAKGEKLPV DFTNRVIYYV GPVDPVKDEA
VGPAGPTTAT RMDKFTDMML EQTGLIAMIG KAERGPVAIE SIKNHKSAYL MAVGGAAYLV
SKAIKNAKVV GFADLGMEAI YEFDVVDMPV TVAVDAGGTS AHITGPAEWQ KKIAAGEYKV
VPMVAA
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