Gene Ajs_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1052 
Symbol 
ID4670656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1103220 
End bp1103882 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID639838171 
Producthypothetical protein 
Protein accessionYP_985363 
Protein GI121593467 
COG category[S] Function unknown 
COG ID[COG3028] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.457164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCA AACCCAAAAA AGGCTATTTT GTGAAGGGCC ATTTCGTTGC CGAAGGCAGC 
GAGATGGACC TGCAGCTCAA GGCCGAACTC AAAGGCACCG ACGGTGCCAC CAAGACCGAC
CTCAAGCGCG AGATGGAGGC GCTGCAGGAC CTGGGCTCCG AGCTGCTCAC GCTGCGCAGC
GACCTGTTCG CGCGCCTGGA CCTGCCCGAA AAGCTCCAGG ATGCATTGGC CGAGGCCCGC
CGCATCACCA ACTTCGAGGG CAAGCGCCGG CAGATGCAGT TCGTGGGCAA GCTCATGCGC
AAGCTGGAAG AAGGCACCGT GGCGGCCATC CACGCCGCGC TGGACGAACA GCGCAACAGC
TCCGCCGCCG AGAAGCTGGC CCTGCACCAG GCCGAGCACT GGCGCGACCG CCTCATTGCG
GACGACAATG CGCTGGCAGC ATGGCTGGAG CAGTTTCCGC GCACGGACAC GCAACAGATC
CGCGCGCTGA TTCGCCAGGC GCGCAAGGAT GCGCCGTCCG ACCATGAGGC CCGGGTGGCC
CAGTCGCAGG GCGAGGCTCC GCGCAAGGGG CGCGCCTACC GCGAACTGTT CCAGCTGGTG
CGCCACCAGA TGACCGAAGC GGCCGCCCTG GCCGTGCATG AGGAGCGCGA AGACGATGCC
TGA
 
Protein sequence
MSRKPKKGYF VKGHFVAEGS EMDLQLKAEL KGTDGATKTD LKREMEALQD LGSELLTLRS 
DLFARLDLPE KLQDALAEAR RITNFEGKRR QMQFVGKLMR KLEEGTVAAI HAALDEQRNS
SAAEKLALHQ AEHWRDRLIA DDNALAAWLE QFPRTDTQQI RALIRQARKD APSDHEARVA
QSQGEAPRKG RAYRELFQLV RHQMTEAAAL AVHEEREDDA