Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1052 |
Symbol | |
ID | 4670656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1103220 |
End bp | 1103882 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639838171 |
Product | hypothetical protein |
Protein accession | YP_985363 |
Protein GI | 121593467 |
COG category | [S] Function unknown |
COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.457164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGCA AACCCAAAAA AGGCTATTTT GTGAAGGGCC ATTTCGTTGC CGAAGGCAGC GAGATGGACC TGCAGCTCAA GGCCGAACTC AAAGGCACCG ACGGTGCCAC CAAGACCGAC CTCAAGCGCG AGATGGAGGC GCTGCAGGAC CTGGGCTCCG AGCTGCTCAC GCTGCGCAGC GACCTGTTCG CGCGCCTGGA CCTGCCCGAA AAGCTCCAGG ATGCATTGGC CGAGGCCCGC CGCATCACCA ACTTCGAGGG CAAGCGCCGG CAGATGCAGT TCGTGGGCAA GCTCATGCGC AAGCTGGAAG AAGGCACCGT GGCGGCCATC CACGCCGCGC TGGACGAACA GCGCAACAGC TCCGCCGCCG AGAAGCTGGC CCTGCACCAG GCCGAGCACT GGCGCGACCG CCTCATTGCG GACGACAATG CGCTGGCAGC ATGGCTGGAG CAGTTTCCGC GCACGGACAC GCAACAGATC CGCGCGCTGA TTCGCCAGGC GCGCAAGGAT GCGCCGTCCG ACCATGAGGC CCGGGTGGCC CAGTCGCAGG GCGAGGCTCC GCGCAAGGGG CGCGCCTACC GCGAACTGTT CCAGCTGGTG CGCCACCAGA TGACCGAAGC GGCCGCCCTG GCCGTGCATG AGGAGCGCGA AGACGATGCC TGA
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Protein sequence | MSRKPKKGYF VKGHFVAEGS EMDLQLKAEL KGTDGATKTD LKREMEALQD LGSELLTLRS DLFARLDLPE KLQDALAEAR RITNFEGKRR QMQFVGKLMR KLEEGTVAAI HAALDEQRNS SAAEKLALHQ AEHWRDRLIA DDNALAAWLE QFPRTDTQQI RALIRQARKD APSDHEARVA QSQGEAPRKG RAYRELFQLV RHQMTEAAAL AVHEEREDDA
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