Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1046 |
Symbol | |
ID | 4674057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1097382 |
End bp | 1098176 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639838165 |
Product | RNA methyltransferase |
Protein accession | YP_985357 |
Protein GI | 121593461 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0565] rRNA methylase |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0448584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCC GCTTCATCCT GATCCAGACC AGCCACGCCG GCAACGTGGG CGCCACGGCC CGCGCCATGA AGACCATGGG TTTCGATGAC CTGGTGCTGG TCGCACCGCG CTGGCCCAAC GTGCTGCGCA AGGAGGAGAC CATCCAGCGG GCCAGCGGCG CGCTGGACGT GCTGGCCCAT GCCCGCATCG TCGCCACGCT GGACGAGGCG CTGGAGGGCG TGAGCCACCT GTGTGCCACG GCGATGACGC CGCGCGACTT CGGCCCGCCC ACGCGCACGC CGCGCCAGCA TTTCGAGATG CTATTGAATA ATGAGCTGTC AGCGCTTGAT GGCAAAGCGC CAGGGGCTGA TTTGGCTAGA AACCCGTCGC CGGAAACCGG CGTGGCCTTC CTGTTCGGCT CCGAGCGTTT TGGCATGGCC AACGAGGATG TGTACCGCTG CCATGTGGCG CTGAGCATTC CCACCAATCC GCAGTTCGGC TCGCTCAACC TGGGCGCGGC GGTACAGGTC ATCGCCTATG AATGGCGGCA GGCCCTCGCC ACCCGTGGGG AGGGCTTTGC GGTGCAGGAG TCCGCCCCTC AGGGCGAGCG CGCGGACGCC GCGCAGGTGG CCGGCATGCT GGCGCACTGG GAGCAGGCGC TCACGGGCAT CGGCTTTCTG GACCCGGCCG CGCCCAAGAA GCTCATGCCG CGCTTGAACC AGCTTTTCAA CCGCGCGCAA CTCACGCAGG AGGAAATCCA CATCCTGCGC GGTGTCGCCA AATCCATGCT GCAGGCCGCG CAGGCAAACC GCTAG
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Protein sequence | MRTRFILIQT SHAGNVGATA RAMKTMGFDD LVLVAPRWPN VLRKEETIQR ASGALDVLAH ARIVATLDEA LEGVSHLCAT AMTPRDFGPP TRTPRQHFEM LLNNELSALD GKAPGADLAR NPSPETGVAF LFGSERFGMA NEDVYRCHVA LSIPTNPQFG SLNLGAAVQV IAYEWRQALA TRGEGFAVQE SAPQGERADA AQVAGMLAHW EQALTGIGFL DPAAPKKLMP RLNQLFNRAQ LTQEEIHILR GVAKSMLQAA QANR
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