| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1028 |
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| Symbol | |
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| ID | 4671628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1071268 |
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| End bp | 1073424 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639838148 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_985340 |
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| Protein GI | 121593444 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.289591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.407367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTC CCCTTGTTCC CCGCCCGCGG CGCACGGCCG TGGCCCAGGC CGCGCAGGCC
GCGCAGGCCG CGCTATGGCT GCTGTGCGGC AGCGCGATCG CACAGACCGC CGAGGCCCCG
CCGGGCGCGC CGGCGGCAAG CGCCACCCCC ACCCTGCGCC AGGTAGACGT GGTCGACTCC
ACGGCGGGCG CCGCCGCCAC GCCCGCGCGC CGCGCGCAAA GCAGCTCGCG CCTGGGCCTG
CCAGTGCTGG AGACGCCGCG CGCCGTGAGC GTGATCGACA GCGCGCTGCT GGAGCAGCAG
TTGGCCACCA CGGAGCGCGA CGTGCTGCGC AACGCGGCCG GCGTGTCCTC GCGCAGCGAA
TACGCAGGCT CGTACTCGCA GTTCGCGATC CGCGGGTTGT GGGCCAACAA CACCTACAAC
TACCTGCGTG ACGGTGCCAA GTTCGTGCAC CTGCTCGATC CACCACTGTT CAACATCGAA
CGCGTCGAGG TCATCAAGGG CCCGGCCGCG CTGGAGTTCG GCCAGGTGGC GCCGGGCGGC
CTCGTCAACT ACGTGAGCAA GCGGCCCCAG GCCGATCCGC TGCGCAGCGT GAAGATCGGT
GCGGGCAGCC ACGGCTGGCG CAATGCCGAA TTCGACCTCA CCGGCCCCCT GAATGCCGAC
GGCACGCTGC GCTACCGGCT GGACGGCGGC GCGAGCCGCG GCGGCAGCTT CGTGGACGGC
AACACGCCGC GCAAGCAGGG CCTGGCCGGC AGCCTGGAAT GGCAGCTCAC GCCGGACACG
CGCTGGCGCG CACAGGCCGA GTACCAAAGC CTGGAAGGCG TATCCACCGT GGGGCTGGCG
GTGCCCGACC CGCAGAACCC GCGCAGCGCG GACGTGCTCC CGGTGGGCAC CTTCTATGGC
GAGCCCTGGC TGCGCACCGA CGGGCACCTG CGCTTTTATT CCACGGAGCT GCAGCACCGC
TTCACCGATA GCCTTGAAGG GCGGGTGCAC CTGTCGCGCA ACGAGACCTT TCGCAACGTG
AACATGGTCT ACCCCATCGG CCCGGTGACG GGCGGCCAGG TGGCGCGCAG CTACTGGCTG
GCACCGGGGC AGAACTACAC GTCGGACACC GCGCTGGCCG AACTGCGCGC ACAAGCGCGG
ACGGGTCCCG TGCGCCATAC GCTGCTCGCC GGGCTGGATT GGCGTGCCAT CGAGGGCGTG
TACGGTGCGC GTGGCACGGG CAACCTGGGT GCAGTGGACC TGTACCAGCC CGTGACGGGC
CTGGTGCCGC CCGCGGCTTC GGGCGGCAGG GCCGCCGTGG CCTCGGACAC GCGCAACACG
GGCCTGTTCG TGCAGGACCG GATCGCCCTG GGTAACTTCA GCCTGCTGCT GGGCCTGCGC
CACGACCGGC TCAAGGACGC TTACACCAAG CCCGCCACGG ATCTGAGCAA GACCCAGCCC
AGCGCCGCGC TGAGCTGGCA GCCCCTGCCC GCCAGCATGT TCTATGTGAG CCATGCGCGC
TCGTTCCAGG CGAACTCGGG CACGCTGCTG TGGGGCGACC GCGCGGCACC GCCCTCCGAG
GGCAAGCAGC TGGAGGTGGG CTGGAAGCAG GAATGGCTGG GCCAGCGCCT GCTCACCACC
GTATCGGCCT TCGCGCTGGA ACTGACCAAC GCACCGGCCA ACGACCCCGA GCACCCCGGC
TACTCGGTGC TGACAGGCCG CCAGCGCATC AAGGGGCTGG AAGTGGAGGC CCAAGGCCGC
ATCACCCCGG GCTGGAGCGT CACCGCGCAG GCCACCTTCC TCGACCCCAA GGTGCTGGCA
GACACCGTGC CCGGCGCCAA CGTGGGCCAC CGCGTCGCGC TCGCCCCGCG GCGCACCGCC
TCGCTGTGGA CCCAGTACCG CCTGCCCGGG GTGCCCGGCC TGTGGGTCGG CGGCGGGCTG
GTCCACCAGG GCGACAAGTT CACCGCCAAC GACAACCGGT GGCGCCTGCC CGGCTACACC
GTGGTGGACC TCGCGCTGGG CTACCAGTTC GGCGGCGGCG TGCGACTGCA AGCCAACCTG
AAGAACGCCG CCAACCGGCG CTACTACGTG GACGCATCCA CCACGGCCGC GGGCTTTGCG
GCCGTCACAC CGGGCGAGCC GCGCTCGCTC TACGTCACGC TGGACTACAC GTTCTGA
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| Protein sequence | MKPPLVPRPR RTAVAQAAQA AQAALWLLCG SAIAQTAEAP PGAPAASATP TLRQVDVVDS
TAGAAATPAR RAQSSSRLGL PVLETPRAVS VIDSALLEQQ LATTERDVLR NAAGVSSRSE
YAGSYSQFAI RGLWANNTYN YLRDGAKFVH LLDPPLFNIE RVEVIKGPAA LEFGQVAPGG
LVNYVSKRPQ ADPLRSVKIG AGSHGWRNAE FDLTGPLNAD GTLRYRLDGG ASRGGSFVDG
NTPRKQGLAG SLEWQLTPDT RWRAQAEYQS LEGVSTVGLA VPDPQNPRSA DVLPVGTFYG
EPWLRTDGHL RFYSTELQHR FTDSLEGRVH LSRNETFRNV NMVYPIGPVT GGQVARSYWL
APGQNYTSDT ALAELRAQAR TGPVRHTLLA GLDWRAIEGV YGARGTGNLG AVDLYQPVTG
LVPPAASGGR AAVASDTRNT GLFVQDRIAL GNFSLLLGLR HDRLKDAYTK PATDLSKTQP
SAALSWQPLP ASMFYVSHAR SFQANSGTLL WGDRAAPPSE GKQLEVGWKQ EWLGQRLLTT
VSAFALELTN APANDPEHPG YSVLTGRQRI KGLEVEAQGR ITPGWSVTAQ ATFLDPKVLA
DTVPGANVGH RVALAPRRTA SLWTQYRLPG VPGLWVGGGL VHQGDKFTAN DNRWRLPGYT
VVDLALGYQF GGGVRLQANL KNAANRRYYV DASTTAAGFA AVTPGEPRSL YVTLDYTF
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