| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1027 |
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| Symbol | |
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| ID | 4671490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1069040 |
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| End bp | 1071193 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639838147 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_985339 |
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| Protein GI | 121593443 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.424895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTTC GCCCTTTCCC CGCCACGCGC ACTGCCGCCG CACAGGCCGC CGTGGCGCTG
CTGTGCGGCG CCGCCGCGCA TGCCCAGACC ACCGAAGCCG CCCTGCCCGC GGTCACCATC
AGCGCCGACC CGGCGCAGCA AAGCGCCACC GAACCGGTAC GGGGCTTCGT GGCCCGCCGC
GCGCTGTCGG CCACCAAGAC CGACACGCCG CTCATCGAGA CACCCCAGGC CATCAGCGTG
GTCACGCGCG ACCAAATGGA AGCCCAGGGA GTACAGACGC TGCGCGAGAC CACGCGCTAC
AGCGCGGGCA TCGTATCGAG CTACTTCGAC AGCCGCGTGG ACAGTTTCAA GGCGCGCGGC
GGCGATGTGA CGCAGTACCT GGACGGGCTG CTGCGCACCT ATGGCACGTA CAACAATGTC
AAGGCAGAGC CCTACACGCT GGAGCGCGTG GAATTCCTGC GCGGCCCCTC TTCGGTGCTC
TACGGCCAGG GCAGCGTGGG CGGCGTGCTC AACCTCACGT CCAAGCGTCC GCTGGCCGAG
CGCCAGCGCG AGGTGCAGGT GCAGATAGGC AGCCATGCGC GCAAGCAGAT CGCCGCCGAC
CTGACCGGCC CGCTGGATGC CGAGGGCCGG TGGCTCTACC GCCTGGTGGC CGTAGGCCGC
GACAGCGGCA CGCAGGTGGA CCACGTGGAC GATGACCGCG TGGTGTTCGC GCCATCGCTC
ACCTGGCGGC CGAGCGCGGA CACCTCGCTC ACGCTGCAGG CGCACTACCA GAAGGACCAA
AGCGGCTCGC TGATCGGCTT CTTCCCCTGG CAGGGCACGC GGCTGCCGAG TGCCTACGGG
CGTATTCCCA CCAACACCTT CATCAGCGAG CCGGGCTGGG ACGCCTACGA CACCGAGAAC
GCCTCCTGGG GCTACCTCTT CAGCCACCGC CTGAACGGCG ACTGGACGCT GCGCCAGAAC
CTGCGCCGCA CCGTGAGCGA CGTGGACTAC CGCACGCTCT ACACCAGCTT CACTGCCAAT
GCCGCCAGCG GCCGACCCGC GCGTCCGGTG TTCGACGCCA ATGGTCGCAC CGTGCTGCGG
GACGCCGCCT GGCAACGCAA CGCCAGCCGC CTGCTGCTCA TCGACACGCA GCTGGAGGGG
CGCCTGCGCG CGGGCGCGGT GGAGCACACG CTGCTGGTCG GCGTGGACGG TCAGCGCAAC
CACACCAGCC AGTCCAGTTG GCGCGCCGTG GCGCCCGCCA TCGACGTGTA TGCACCGGTG
TACGGCAACT TCACCCCGCC CAGCAGCGCC GCCCTGACGG CCCTGCCCGA CGTGACGCAG
CGCCAGCTGG GCCTGTACCT ACAGGACCAG ATGCGCTGGG GTGCGTGGAC CGCCACGCTC
GGCCTGCGCC ATGACCGCGC CAAGACCGAC ACCGAAGGCC GCCCCGCCGC GGCGGTGGAC
GACAAGGCCT GGACCAAGCG CCTGGGCCTG ACCTACCAGG CCGGCGGGGG CTGGGCACCG
TATGTGGGCT ATTCAGAGTC GTTCCAACCG CTGGGCGGCG TCAACGTGTA CGGCACGGCC
TACAAACCCC AGCGCGGCCA GCAGTGGGAG GCCGGCGTGA AGTGGATGCC CGAAGGGCGC
GGCATCTCGG CCTTTGCGGC GCTCTACCAC CTGCGCGAGA AGAACCGCAA GACCACCGAC
CCGAGCAACC CGCTCAACAG CCTGCAGATC GGCGAGGTCA CCATCAAGGG TCTCGAAGCC
GAGATGACCG CCAGCCTGGC GCGCCATTGG GACTGGACGC TGGGCTATGC CTATGCCGAC
GCCACCATCA GCCGCAGCAA CGCGGGCGAC CAGGGCCAGC GCGTGGCGGG CGTGCCGCGG
CACACGGCGT CCAGCTGGCT CATGCACCGC TTCGCGGCCC AGGGCCGGGG CGGCTGGACG
GTGGGCGCCG GCGTGCGCTA CACCGGATCG CAGTGGACCG GCACACCGGC CATCGATACC
CCGTCGGTGC TGCTGGCCGA TGCCATGGTG GCCTACGACG CGGGCGATTG GCGCCTGGCG
CTGAACATCA ACAACCTGAC GGACAAGGTC AACATCACCC AGTGCCTGGC GCGCGGCGAC
TGCTTCTATG GCGAGCGCCG CAACGTGCTG CTGACGGGCA CCTACCGCTT CTGA
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| Protein sequence | MIFRPFPATR TAAAQAAVAL LCGAAAHAQT TEAALPAVTI SADPAQQSAT EPVRGFVARR
ALSATKTDTP LIETPQAISV VTRDQMEAQG VQTLRETTRY SAGIVSSYFD SRVDSFKARG
GDVTQYLDGL LRTYGTYNNV KAEPYTLERV EFLRGPSSVL YGQGSVGGVL NLTSKRPLAE
RQREVQVQIG SHARKQIAAD LTGPLDAEGR WLYRLVAVGR DSGTQVDHVD DDRVVFAPSL
TWRPSADTSL TLQAHYQKDQ SGSLIGFFPW QGTRLPSAYG RIPTNTFISE PGWDAYDTEN
ASWGYLFSHR LNGDWTLRQN LRRTVSDVDY RTLYTSFTAN AASGRPARPV FDANGRTVLR
DAAWQRNASR LLLIDTQLEG RLRAGAVEHT LLVGVDGQRN HTSQSSWRAV APAIDVYAPV
YGNFTPPSSA ALTALPDVTQ RQLGLYLQDQ MRWGAWTATL GLRHDRAKTD TEGRPAAAVD
DKAWTKRLGL TYQAGGGWAP YVGYSESFQP LGGVNVYGTA YKPQRGQQWE AGVKWMPEGR
GISAFAALYH LREKNRKTTD PSNPLNSLQI GEVTIKGLEA EMTASLARHW DWTLGYAYAD
ATISRSNAGD QGQRVAGVPR HTASSWLMHR FAAQGRGGWT VGAGVRYTGS QWTGTPAIDT
PSVLLADAMV AYDAGDWRLA LNINNLTDKV NITQCLARGD CFYGERRNVL LTGTYRF
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