| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1016 |
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| Symbol | |
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| ID | 4672672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1054114 |
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| End bp | 1056468 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639838138 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_985330 |
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| Protein GI | 121593434 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.969284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC AACCCACTCT CGACTTCTCC GCGCCCGCCG ACCACGGCGA CAGCCTGGAA
CTGGCCGGCT ATGCCCAGCG CGCCTATCTG GAATACGCCC TCTCGGTCGT CAAGGGCCGC
GCGCTGCCCG ACGTGTGCGA CGGTCTCAAG CCCGTGCAGC GGCGCATCCT CTACGCCATG
GACCGCATGG GTCTGGGCTA CAGCGGCCCG AACCGCAACG TGGCGGCCAA GCCTGTCAAA
AGCGCCCGCG TGGTGGGCGA CGTGCTGGGC CGCTTTCACC CGCATGGCGA CCAGTCGGCC
TACGACGCAC TGGTGCGCCT GGCGCAGGAC TTCAACCAGC GTTACCCGCT GATCGACGGC
CAGGGCAACT TCGGCAGCCG CGATGGCGAC GGCGCGGCGG CCATGCGCTA CACCGAGGCG
CGCCTGACCC GCATCGCCGG CCTGCTGCTG GACGAGATCG ACATGGGTAC GGTGGATTTC
GTGCCCAACT ACGACGGCAG CACGCAGGAG CCGCGCCAGC TGCCCGCGCG GTTGCCGTTC
GCGCTGCTCA ATGGCGCCAG CGGCATCGCC GTGGGCCTGG CCACCGAGAT CCCCAGCCAC
AACCTGCGCG AGGTGGCCGA CGCCTGCGTG GCCCTGGTCA AGAAGCCGCA GCTGAGCGAC
GAGGAGCTGT TCGCGCTGGT CCCCGGCCCT GACTACCCGG GCGGCGGCCA GATCATCAGC
ACTGATGCGG ACATCCAGGA CGCCTACCGC ACGGGCCGCG GCAGCCTCAA GGTGCGCGCG
CGCTGGAAGA TCGAGGACCT GGCGCGCGGC CAGTGGCAGA TGGTGGTGAC CGAGCTGCCG
CCGGGCGTCT CCGCGCAGAA GGTGCTGGAG GAGATCGAGG AACTCACCAA CCCCAAGGTC
AAGACCGGCA AGAAGGCGCT CACGCAGGAG CAGACGCAGC TCAAGGCCGC GCTGCTGGCG
CTGCTGGACG GCGTGCGCGA CGAGTCCAGC AAGGACGCGC CGGTGCGCCT GGTCATCGAG
CCCAAGACCG GCAAGGTGCC GCAGCAGGAC CTCATCACCG CGCTGCTGGC GCACACCAGC
CTGGAGACTT CCGCGCCCAT CAACCTGACC ATGGTGGGGC TGGACGGCAG GCCCGTGCAG
AAGTCGCTGC GCGAGATGCT GCAGGAGTGG ATCGACTTCC GCCAGACCAC CATCACGCGG
CGCAGCCAGC ACCGGCTGGA CAAGGTGCTG GACCGCATCC ACATCCTGGA GGGGCGGCAA
CTGGTGCTGC TGAACATCGA CGAGGTGATC GCCATCATCC GCCAGGCCGA CGAGCCGAAG
GCGGCGCTGA TCGCGCGCTT TCACCTGTCG GACCGCCAGG CCGAGGACAT TCTGGAAATC
CGCCTGCGCC AACTGGCGCG GCTGGAAGCC ATCAAGATCG AGCAGGAGCT GAAAGAGCTG
CGCGACGAGC AGGGGAAGCT GGAGGACATC CTCGCCAACC CCGCCTCGCT GCGCCGCTTG
ATGGTCAAGG AGATCGAGGC AGATGCCAAA CTGTTCGGCG ATGCGCGCCG CACGCTGATC
CAGGCCGAAA AGAAGGCCGT GGCCGAGGTC AAGGTGCTGG ACGAACCCGT CACCGTGGTG
GTGTCCGAAA AGGGCTGGGT GCGTGCGCGC CAGGGCCACG GGCACGAGGC GGGCAGCTTC
GCCTTCAAGT CGGGCGACGG CCTGTACGGC ACCTTTGAGT GCCGCACGGT GGACACGCTC
ATCGTCTTCG GCAGCAACGG GCGGGTGTAC TCGGTGGCCG TGTCCAGCCT GCCGGGCGGG
CGCGGCGACG GCCAGCCCAT CACCACGCTG ATCGAGCTGG AGGCCGGCAC GCAACCGGTG
CACTACTTCG CCGGACCGGC CAACGCAGCG CTGCTGCTTG CGGGCTCGGG CGGCTATGGT
TTCCTGTCCA CCGTGGAGCA CATGACCGCA CGCAACCGCG GCGGCAAGGC CTTTGTGAAC
CTGGGTGAGG GCGAACGCCT GTGCCGCCCC TCGCATGCGG CGTTCACCAG CGGCAGCCAG
CCGCTGGCGC CCGCCACCCA TGTGTGCTGC GCATCCGTGG GTGGGCGAGT GCTCACGTTT
GAGATCGCCG AACTCAAGCT CATGGAAAAG GGGGGCCGCG GGCTGATGCT CATCGACCTG
GAGCCCAAGG ACCAACTGGC CGGCGCGGCG GCCTACACGC GCAGCGTGCG CTTCGTGGGC
GTGGGCCGTG GCGGCAAGCC GCGCGAGGAG CAACTGGAGA TCCGCTCGCT CAACAACGCG
CGCGCGGCGC GCGGGCGCAA GGGCAAGGCG GCCGACCTGG GTTTCAAGCC GTCCGACGTG
CTGCGCGTGG AGTGA
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| Protein sequence | MSDQPTLDFS APADHGDSLE LAGYAQRAYL EYALSVVKGR ALPDVCDGLK PVQRRILYAM
DRMGLGYSGP NRNVAAKPVK SARVVGDVLG RFHPHGDQSA YDALVRLAQD FNQRYPLIDG
QGNFGSRDGD GAAAMRYTEA RLTRIAGLLL DEIDMGTVDF VPNYDGSTQE PRQLPARLPF
ALLNGASGIA VGLATEIPSH NLREVADACV ALVKKPQLSD EELFALVPGP DYPGGGQIIS
TDADIQDAYR TGRGSLKVRA RWKIEDLARG QWQMVVTELP PGVSAQKVLE EIEELTNPKV
KTGKKALTQE QTQLKAALLA LLDGVRDESS KDAPVRLVIE PKTGKVPQQD LITALLAHTS
LETSAPINLT MVGLDGRPVQ KSLREMLQEW IDFRQTTITR RSQHRLDKVL DRIHILEGRQ
LVLLNIDEVI AIIRQADEPK AALIARFHLS DRQAEDILEI RLRQLARLEA IKIEQELKEL
RDEQGKLEDI LANPASLRRL MVKEIEADAK LFGDARRTLI QAEKKAVAEV KVLDEPVTVV
VSEKGWVRAR QGHGHEAGSF AFKSGDGLYG TFECRTVDTL IVFGSNGRVY SVAVSSLPGG
RGDGQPITTL IELEAGTQPV HYFAGPANAA LLLAGSGGYG FLSTVEHMTA RNRGGKAFVN
LGEGERLCRP SHAAFTSGSQ PLAPATHVCC ASVGGRVLTF EIAELKLMEK GGRGLMLIDL
EPKDQLAGAA AYTRSVRFVG VGRGGKPREE QLEIRSLNNA RAARGRKGKA ADLGFKPSDV
LRVE
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