| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1015 |
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| Symbol | |
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| ID | 4672666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1053239 |
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| End bp | 1054117 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639838137 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_985329 |
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| Protein GI | 121593433 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAACA GCCTTTTGGG GCTTTTGCGC ACGGCTGGCA TGTGCTGCGC GCTCCTGTTT
TTGCAGCAAA CCGCGCATGC GGACCTGTGG GCCTTCGTGG ACGAGCGCGG CGTGACGCAC
TTCGCCGCGC AGCAGCTGGA CGAGCGTTAC GCGCTGTTCT TCCGCGGCAA CGACTTCGAC
TCCGAGCGCG ACGGCTCCAA CACCGGACGT CAGGGTGCGG CCGATGTCTC CACCGGGCCG
GCCAGTCCCT CGGGGGCGCG GCTGCTGGCC TTCTTCGAGG TGTCGCACGA CTACAAGCTC
GTGCGCCAGC ACCTGCGCTC GGCGTCGGCG CGCCATGGCG TGGACTACGC GCTGCTGCAG
GCGGTGATCG CCACCGAGTC GGGTTTCAAC ACCCGTGCGG TCTCGCCGCG CGGCGCCGTG
GGGCTGATGC AGCTCATGCC CGCCACCGCC AGCCGCTTCG GCGTGAGCGG CGACGCCAGG
CGCTCGGTGG AGCAAAAGCT GGTGGACCCC GCCACCAACG TGGCCGCGGG CACGCGCTAC
CTGCGCTACC TCATGGATCT CTTCGAGGGC CGCCTGGACT TGGCGCTGGC AGCCTACAAC
GCGGGCGAGG GTGCCGTGCA GCGCGCCGGC AACCGCGTTC CCGCCTACCG CGAGACGCGC
AACTACGTAC AGAGCGTGAT GGGCCTGTAT GCGCTGCTCA AGCCGCCGCT ACCGACGCGC
AATCAGCGCG CGAACCCGGG GCGCGTGCGC ATGGAACTGC CCGCCACGCC CCATTCCCTA
TCCGATGCCG GTGAGCGCGG CGACACGCAG CGCATGTCCA CGCCTGCGCC CACGCGCCTG
GCCCGGCAGT CATCGACCGA GTCTGTCTTC ACTGAATGA
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| Protein sequence | MRNSLLGLLR TAGMCCALLF LQQTAHADLW AFVDERGVTH FAAQQLDERY ALFFRGNDFD
SERDGSNTGR QGAADVSTGP ASPSGARLLA FFEVSHDYKL VRQHLRSASA RHGVDYALLQ
AVIATESGFN TRAVSPRGAV GLMQLMPATA SRFGVSGDAR RSVEQKLVDP ATNVAAGTRY
LRYLMDLFEG RLDLALAAYN AGEGAVQRAG NRVPAYRETR NYVQSVMGLY ALLKPPLPTR
NQRANPGRVR MELPATPHSL SDAGERGDTQ RMSTPAPTRL ARQSSTESVF TE
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