Gene Ajs_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1009 
Symbol 
ID4673612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1047063 
End bp1048205 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content66% 
IMG OID639838131 
ProductNlpB/DapX family lipoprotein 
Protein accessionYP_985323 
Protein GI121593427 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCGTA TTTGGAACGC TCCCGGCCGA ATCTGGATCA ATGAGGATTT TCGCGTGAAC 
GCTACCACCC GTTTGGGCCT GCTGGGCCTT GCCGTGACCC TGTCTGCTTG CTCCGTGCTG
GAGAACGACA AGATCGATTA CAAAAGCGCC ACCAAGGGGG CAACGCTGGA GGTGCCTCCG
GACCTGACGC AGCTCTCGCG CGACACACGC TACACGGTGC CTGGCGGGGT CGTGTCTGCT
GCCGCTTTCG AAGCCGGCCA GGCGCAACAG CCCCGCGGCG CGGCGAGCGC AGCCCCGAAG
TCCATTGGAG ACGTACGCAT CGAGCGCGAC GGCAACCAAC GATGGCTGGT GGTGGACCGC
CCTGCCGACC AACTGTGGGA CCCGGTGCGT GACTTCTGGA TCGAAAACGG CTTCGTGTAC
GTGCTGGAAC AACCCAAGCT CGGCCTGCTG GAGACCGACT GGGCCGAAAA CCGCGCCAAG
CTGCCGCAGG ACATCATCCG CTCCACGATC GGCAAGGTCT TCGATTCGCT GTATTCCACG
GGCGAACGCG ACAAGTTCCG GACCCGCCTG GAGCGCAACG CCAGCGGCGG CACGGAGATC
TACATCAGCC ACCGCGGCAT GGTGGAGGTC TACACCAACA CCCAGAAGGA CAACACCGTC
TGGCAGCCCC GCCCGGCCGA TCCGGAACTG GAAACCGAAT TCCTGCGCCG GCTGATGGTC
AAGCTGGGCG TGAGCGAGGA GCAATCCAAG GCCGCCGCCG CAGCGCCCGT ACCCTCCGCC
CCGTCCGCGC GCATGGCCAC GGTGGACAAC GTGCCGGTGG TGCAGCTTGA TGAAGGCTTC
GACCGCGCGT GGCGCCGCGT GGGCGTGTCG CTGGACCGCA CCGGCTTCAC CGTGGAGGAC
CGAGACCGCA GCCAGGGTGT GTACTTCGTA CGCTACGTCG CCCCGACCGA GAAGAAGGAG
CAAGGCTTCT TCAGCAAGCT GTTCAGCCGC TCGCCCGACG CGGTGCCGCC GCTGAAGTAC
CGCATCGTGG TGCGCAGCGA GGGCAACCGA AGCACCGTGT CTGTGCTCAA CGCCGCAGGC
GCGCCCGAGA CCTCCGCCAA TGCACAGCGC ATCGTGCGCG TGCTCGCGGA TGATCTGAAG
TAA
 
Protein sequence
MQRIWNAPGR IWINEDFRVN ATTRLGLLGL AVTLSACSVL ENDKIDYKSA TKGATLEVPP 
DLTQLSRDTR YTVPGGVVSA AAFEAGQAQQ PRGAASAAPK SIGDVRIERD GNQRWLVVDR
PADQLWDPVR DFWIENGFVY VLEQPKLGLL ETDWAENRAK LPQDIIRSTI GKVFDSLYST
GERDKFRTRL ERNASGGTEI YISHRGMVEV YTNTQKDNTV WQPRPADPEL ETEFLRRLMV
KLGVSEEQSK AAAAAPVPSA PSARMATVDN VPVVQLDEGF DRAWRRVGVS LDRTGFTVED
RDRSQGVYFV RYVAPTEKKE QGFFSKLFSR SPDAVPPLKY RIVVRSEGNR STVSVLNAAG
APETSANAQR IVRVLADDLK