Gene Ajs_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1008 
Symbol 
ID4673298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1046247 
End bp1047029 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID639838130 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_985322 
Protein GI121593426 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCT TTCGCAATCT GGCCAGCGGC AGCACCGGCA ACGCCACGCT GGTTGAAGGG 
CGTAGCGGCG CGCATACCCG GCGCCTGCTC GTGGATTGCG GGCTGGGCAT CCGGCAACTG
CAATGGCGCC TGGAGGCTGC CGGCACGGCC CCGGCGCAGT TGGATGCCGT CTTCATCACG
CATGAGCATT CCGATCATGT GGGCTGCGTG CTGAAGCTCG CCCTGCGCGA ACGCATCCCC
GTTTGGATGA GCGAGGGCAC CTACGACGCC CTAGGGGCAC CCGACCTTGA CGGCCTGCTG
CATGTGGCGT GCGATGGCGT ACCCGTCGAT ATGGGCAGCT TTTGCGCACA TCCTTTCAGC
GTGCCGCATG ACGCACGTGA ACCATTGCAC TTGCGCTGCA GCGATGGCGC GACGCACATC
GGCCTACTGA CCGACCTGGG CCATGCGGCA GAAACGGTGG TGGAACGGCT GCAGGGTTGT
CACGCGCTGC TGCTCGAAGC CAACCACGAC GCCGACCTTC TGGCGTCGGG CGACTATCCC
GTGTTCCTGA AGCGGCGCAT CGCAGGTCCG CGTGGGCACC TTCCCAACCA TGTCAGCGCG
GACATCCTGC ACGCCGTACA TCACCCGAAT CTGCGACACG TGGTGGCTGC ACACCTGAGC
GCACGCAACA ACCGACCGGA ACTCGCGCAA TCCGCTCTGG CGCAAGCTGT GGGGTGGCAT
GCAAGTGACA TCGTAGTGGC CGATCCGCGC GAGGGCACTC CCTGGATCGA GGCCAGCTAC
TGA
 
Protein sequence
MLRFRNLASG STGNATLVEG RSGAHTRRLL VDCGLGIRQL QWRLEAAGTA PAQLDAVFIT 
HEHSDHVGCV LKLALRERIP VWMSEGTYDA LGAPDLDGLL HVACDGVPVD MGSFCAHPFS
VPHDAREPLH LRCSDGATHI GLLTDLGHAA ETVVERLQGC HALLLEANHD ADLLASGDYP
VFLKRRIAGP RGHLPNHVSA DILHAVHHPN LRHVVAAHLS ARNNRPELAQ SALAQAVGWH
ASDIVVADPR EGTPWIEASY