| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1001 |
|---|
| Symbol | |
|---|
| ID | 4674270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1040940 |
|---|
| End bp | 1042160 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639838123 |
|---|
| Product | phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase |
|---|
| Protein accession | YP_985315 |
|---|
| Protein GI | 121593419 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
|---|
| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.729544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC AGTTGGCTGG CAAACACATT GTCCTGGGCT TGAGCGGCGG CGTGGCCTGC
TACAAATCGG CGGAACTGTG CCGGCTGCTG GTGAAGGCCG GCGCCACGGT GCAGGTGGTC
ATGACCGAGG CGGCTGCGCA GTTCATCACG CCCGTGACCA TGCAGGCGCT GTCGGGACGC
AGCGTCTACA CCTCGCAGTG GGACGCGCGC GAGGCGAACA ACATGCCCCA TATCAACCTG
AGCCGCGAGG CGGACGCGAT CCTCATTGCG CCGTGCAGCG CGGACTTCAT CGCGCGGCTG
GTGCAGGGGC GGGCCGACGA GTTATTGAGC CTGCTGTGTC TGGCACGGCC CCGGGATCGG
GTGCCGTTGC TGCTGGCCCC CGCCATGAAC CGCGAGATGT GGGGCCACCC GGCCACTCAG
CGCAACCTGG CCCAGGTGGC GCGCGACGGC GCAACGGTGC TGGGCGTGGG CTTTGGTGAC
CAGGCCTGTG GCGAGACGGG CGACGGCCGC ATGCTGGAGG CCGCGGAGAT TCTGGAGGAA
CTGGAGGCCT TCTTCACCCC CCAGTTGCTT ACGGGCCAGC ACGTGCTGAT TACCGCTGGC
CCCACCTTCG AGGCCATTGA CCCGGTGCGC GGCATCACCA ACCTGTCCAG CGGCAAGATG
GGCTTTGCGA TTGCCCGCGC GGCGCGTGCC GCTGGCGCAC AGGTCACATT GGTCGCCGGG
CCGGTGCATC TGCCCACCCC GCGGGGCGTG CGCCGCATCG ACGTGCGTTC AGCAAAAAAT
ATGCTTGCAA TCGTTGAGGA GCAAGCGCGA GAAGCTACTA TTTTCATAGC TACGGCCGCG
GTGGCGGACT GGCGTCCCGC CACTGCTGCG CTGCACAAGA TCAAGAAAGA CGGCACGGGC
GACGTGCCGG CGCTGGAGTT TGTGGAGAAC CCCGACATCC TGGCCACGGT GGCGCGCACC
GAACGCGCGC GCGCTGGCCG TCTGTACTGT GTGGGGTTTG CCGCCGAGAG CGAGAACCTG
CTGGAGCATG CCAGCGCCAA GCGCGAGCGC AAGGGCGTGC CGTTGCTGGT GGGCAATATC
GGCCCGGCCA CGTTCGGGCA GGACGACAAT GCGCTGCTGC TGGTCGACGC GCAGGGCCAT
CGTGAACTGC CCCGTGCTTC CAAGGAGGCG CTGGGCCATC AGCTCGTGGC GGAGATCGCG
CGGCGCCTTG CCGCCGTTTG A
|
|---|
| Protein sequence | MNEQLAGKHI VLGLSGGVAC YKSAELCRLL VKAGATVQVV MTEAAAQFIT PVTMQALSGR
SVYTSQWDAR EANNMPHINL SREADAILIA PCSADFIARL VQGRADELLS LLCLARPRDR
VPLLLAPAMN REMWGHPATQ RNLAQVARDG ATVLGVGFGD QACGETGDGR MLEAAEILEE
LEAFFTPQLL TGQHVLITAG PTFEAIDPVR GITNLSSGKM GFAIARAARA AGAQVTLVAG
PVHLPTPRGV RRIDVRSAKN MLAIVEEQAR EATIFIATAA VADWRPATAA LHKIKKDGTG
DVPALEFVEN PDILATVART ERARAGRLYC VGFAAESENL LEHASAKRER KGVPLLVGNI
GPATFGQDDN ALLLVDAQGH RELPRASKEA LGHQLVAEIA RRLAAV
|
|---|
| |