| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0989 |
|---|
| Symbol | |
|---|
| ID | 4674597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1029595 |
|---|
| End bp | 1030572 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639838112 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_985304 |
|---|
| Protein GI | 121593408 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATT CCGTGCGCCG TCGCGTGCTG GCCTCCCTCG CGCTGGCTGC CGCGCTGCCC
CTGGGCGCGC AGGCCCAGAC TTGGCCCGCC AAGCCCATCC GCATCGTCGT GGCCTATCCC
GCGGGCGGCG TCAGCGACGT GGTCGCCCGC GCGTTGGGCG ACAAACTGTC CGAACGCCTG
GGCACGCCCG TGGTGGTGGA GAACAAGGCC GGCGCGGGCG GCACCATCGG CATGGACGCG
GTGGCCAAGG CGGCGCCCGA TGGCTACACG CTGGGCTTCT CGGCGATCAG CCCGCTGGTG
CTCAACCCGC ACCTGGGCAC GCCGCCGTAC GACGCAACGC GCGACATCGT GCCCGTGGCC
AGCGTGATGT ACTCGCCCGT GCTGTTGTTG GGCACGCAGG CCGCCAAGGA GCGTGACTTC
CGCAGCCTGC TGGCGACCGC CAAGGCGCAG CCGGGCCAGG TGCGATGGGC CACATCGGGG
CTGGCGTCGC TGGGCCACAT CATGCTGGAA CACATCATGC AGGGCAGCGG CGTGCAGATC
ACGCACGTGC CCTACAAGGG CGGCGGGCAA CAACTGAACG ATGCGCTTTC GGGTCAGTTC
GAGGTGCTGT CCACCAACGC CGGCCCGGCC GTGATGCAGC AGATCAAGGC GGGCAAGCTG
CACCCGCTGG CCGTGGGTGC GCCCGCGCGG CTGACCACCC TGCCGAACGT GCCCACGCTG
GGCGAACTGG GCCTGCCCGC GGCCAACCTG AATTCGGTGT TCGGCATGTT CGCGCCAGCG
GGCGTGCCGG CCGCGGTGCT GGAGCGCTTG AATGCCGAGA TCAACCGTGC GCTGGCGCTG
CCTGACATCC AGGCGCGCCT GGAGGCTTCG GACAACGTGC CCACGGGCGG CAGCGCCGAG
GCATTTCGCC GGCAGATCGC GGCGGAGTCG CAGAGCAACG CGCGCATCAT CCGCGCCGCC
AACATCCGCC TGAACTGA
|
|---|
| Protein sequence | MTDSVRRRVL ASLALAAALP LGAQAQTWPA KPIRIVVAYP AGGVSDVVAR ALGDKLSERL
GTPVVVENKA GAGGTIGMDA VAKAAPDGYT LGFSAISPLV LNPHLGTPPY DATRDIVPVA
SVMYSPVLLL GTQAAKERDF RSLLATAKAQ PGQVRWATSG LASLGHIMLE HIMQGSGVQI
THVPYKGGGQ QLNDALSGQF EVLSTNAGPA VMQQIKAGKL HPLAVGAPAR LTTLPNVPTL
GELGLPAANL NSVFGMFAPA GVPAAVLERL NAEINRALAL PDIQARLEAS DNVPTGGSAE
AFRRQIAAES QSNARIIRAA NIRLN
|
|---|
| |