| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0988 |
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| Symbol | |
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| ID | 4674715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1028604 |
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| End bp | 1029515 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639838111 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_985303 |
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| Protein GI | 121593407 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.252447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTTCG CCATGTTGCC CGACAGCCAG AACGCCATAG ACCCCTTCAT CGACGCCCTT
TGGCTGGAGG ACGGCCTGTC GCGCAACACG CTGGCCGCCT ACCGCCGGGA CCTCACGCTG
TATGCCCAAT GGCTGGCGCA GCAGAACCCT CCGCTGGCGC TGGATGCCAC GGCCGAGCAC
CACCTGCAGG GCTACTTCGC TGCCCGCCAC GCGCAGACGC GCGCCACGTC GGCCAACCGC
CGCCTCACCG TGCTGCGGCG CTACTTCCAC TGGGCATTGC GCGAGCGACG CATCGCAGCC
GACCCCACAG TGCGCCTGCA AGCCGCGCGC CAGCCGCTGC GCGTGCCCAA GACGCTGACG
CAGGCGCAGG TGGAGGCCCT GCTGCATGCG CCGGACGATG CCACGCCGCT GGGCCTGCGC
GATCGCACCA TGTTGGAGCT GATGTACGCG AGCGGCCTGC GCGTGAGCGA GCTGGTCACG
CTGAAGACCT TCCACCTGGG GCTGGCCGAA GGCGTGCTGC GCGTCATGGG CAAGGGCGGC
AAGGAGCGGC TGGTGCCCTT TGGCGAAGAG GCGCACCGCT GGCTGCAGCG CTACCTGGCC
GAGGGGCGTG GCGCCATCCT GGGCGGGCAA CAAACGGATG ACCTGTTCGT CACGCAGCGC
GGCGCGGCCA TGTCGCGCGT GATGTTCTGG GTCATCGTCA AGAAATGCGC GCAGGCTGCG
GGCATTACCG CGCCGCTGTC GCCCCACACG CTGCGCCATG CCTTTGCCAC GCACCTGTTG
AACCACGGTG CGGACCTGCG CGTGGTGCAA CTGCTGCTGG GCCACGCCGA CATTTCCACC
ACCACCATCT ACACCCACGT GGCGCGCGAG CGGCTGAAGG CGCTGCATGC GCAGCACCAT
CCGCGCGGTT GA
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| Protein sequence | MVFAMLPDSQ NAIDPFIDAL WLEDGLSRNT LAAYRRDLTL YAQWLAQQNP PLALDATAEH
HLQGYFAARH AQTRATSANR RLTVLRRYFH WALRERRIAA DPTVRLQAAR QPLRVPKTLT
QAQVEALLHA PDDATPLGLR DRTMLELMYA SGLRVSELVT LKTFHLGLAE GVLRVMGKGG
KERLVPFGEE AHRWLQRYLA EGRGAILGGQ QTDDLFVTQR GAAMSRVMFW VIVKKCAQAA
GITAPLSPHT LRHAFATHLL NHGADLRVVQ LLLGHADIST TTIYTHVARE RLKALHAQHH
PRG
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