Gene Ajs_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0987 
Symbol 
ID4674009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1027585 
End bp1028547 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID639838110 
Producthypothetical protein 
Protein accessionYP_985302 
Protein GI121593406 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.172167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTC GCAACCTGCT GGCTTTGGCG CTGGCGGCCA CCGCGGGCAC CGCCTTCGCC 
CAGGGCTACC CCAACAAGCC CGTCAAGCTG CTAGTGCCCT TCGCGCCCGG CGGCACCACC
GACATCATCG CCCGCGTGAT CGCCGACCCA CTGTCGCGCG CGCTCGGCCA GTCGGTGGTG
GTGGAGAACC GGGGCGGCGG CGGCGGCGTG ATTGGCGCGC AGGAAACGGC GCGCGCAGCA
CCCGATGGGT ACAACCTGGG CGTGGCCACC GTGTCCACCA CGGCGGCCAA TCCGGCCATC
AACTCCAAGA TCCCGTACAA CCCGATCACG GACTTCACGC CCATCATCAA CATCGCGGCC
ACGCCCAACA TCATCGCGGT GCACCCCAGC TTCCCGGCCA AGGACTACAA GTCCTTCCTG
GCGGAGATCC AGAAGAACCC CGGCAAGTAC TCGTACGCGT CCTCGGGCAC AGGCGGCATC
GGCCACCTGC TGATGGAGCT GTACAAGAGC CTCACCAACA GCTTCGTCAC GCATATTCCC
TACCGCGGCG CGGGTCCGGC CCTCAACGAC ACCGTGGCGG GTCAGGTGCC CATCATCTTC
GACAACCTGC CCTCGGCGCT GCCCTTCATC AAGAGCGGCA AGCTCGTGCC CATCGTGGTG
TCCGCGCCGC AGCGCGTGGC GGCACTGCCC AATGTGCCCA CCTTCAAGGA AGTGGGCCTG
GAGCCGGTGA ACCGCATGGC CTATTACGGC ATCCTGGGTC CCAAGAACCT GCCCAAGGAC
GTGGTGGACA AGATCAACGG CGGCGTGAAG AAGGCGCTCG AAGATGCCGC CGTACGCAAG
CGCATCGAGG ACACCGACTC GATCATCGTC GCCAACACGC CCGAGCAGTT CGCCGAGCAG
ATCAAGGCCG AGTTCGGCGT GTACAAGCAG GTGGTGCAGA AGCAGAAGCT CACGCTGGAA
TAA
 
Protein sequence
MQRRNLLALA LAATAGTAFA QGYPNKPVKL LVPFAPGGTT DIIARVIADP LSRALGQSVV 
VENRGGGGGV IGAQETARAA PDGYNLGVAT VSTTAANPAI NSKIPYNPIT DFTPIINIAA
TPNIIAVHPS FPAKDYKSFL AEIQKNPGKY SYASSGTGGI GHLLMELYKS LTNSFVTHIP
YRGAGPALND TVAGQVPIIF DNLPSALPFI KSGKLVPIVV SAPQRVAALP NVPTFKEVGL
EPVNRMAYYG ILGPKNLPKD VVDKINGGVK KALEDAAVRK RIEDTDSIIV ANTPEQFAEQ
IKAEFGVYKQ VVQKQKLTLE