| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0985 |
|---|
| Symbol | |
|---|
| ID | 4674109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1025376 |
|---|
| End bp | 1026461 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639838108 |
|---|
| Product | putative iron-sulfur cluster binding protein |
|---|
| Protein accession | YP_985300 |
|---|
| Protein GI | 121593404 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1600] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | [TIGR00276] iron-sulfur cluster binding protein, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.188512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTGCA GCAGTCAACT CGTTCCTCAA ATACAAGGCT GGGCCCGCGA GCTGGGATTT
TCCCAAATCA AGGTGGCCGG CGTGGACTTG TCCTCCGCCG AGCCCGGATT GATGCAATGG
CTGGCCCAAG GGTTCCATGG CGAGATGCAT TACATGGCTG CGCATGGCCT GAAGCGTGCC
CGCCCGGCGG AGCTGGTGCC CGGCACCGTG AGCGTGATCA CCGCGCGCAT GGACTACCTG
CCGCGGGCGA CGGCGCTGGA AGCCGCCGAA GGCTGGCAGG CCATTGAACT TGGCCGGCTG
GCGCGACCCA CCGAGGCGGT GGTTTCCGTC TACGCCCGGG GACGCGACTA CCACAAGGTG
CTGCGCGCGC GGCTGCAAAA GCTCAGCGAC CGTGTCGCCG AGGCGGTGGG GCCCTTTGGC
CACCGCGTGT TCACCGACTC GGCGCCGGTG CTGGAGGCCG AGCTTGCGCG CCGCAGCGGC
CAGGGCTGGC GCGGCAAGCA CACACTGGTG CTGAGCCGCG AGGCCGGCTC GATGTTCTTT
CTGGGCGAGA TCTATGTGGA CATGCCCCTT GAACCCACCG AGCCCGTCAC CCACCACTGC
GGCAGTTGCC AAGCATGTAT CGACGTCTGC CCCACGCAGG CCATCATCGC GCCGTACCGC
CTGGATGCGC GCCGCTGCAT CTCCTACCTC ACCATCGAGC ACGCCGGGCC CATTCCGCTG
GAGTTGCGCC CGCTCATGGG CAACCGCATC TATGGCTGCG ACGACTGCCA GCTCATCTGC
CCGTGGAACA AGTTCGCGCA GACCAGCAGC CTGCCCGATT TCGATGTGCG TGCGGGGCTG
GTGGGGCAGC AGCTCGTGCA TCTGTTTACG TGGGACGAGG AGACCTTCCT GCGCATGACC
GAGGGCGGCC CGATCCGTCG CATCGGCCAT GAGCGCTGGC TGCGCAACAT CGCCGTGGCG
CTGGGCAACG CGTTGCGCGC GACCCGCGAC CCTGTCGTTC GCGCCGCGCT GGCTGCGCGT
GCCAATGACC CGAGCCCGCT GGTGCGCGAG CATGTGGCCT GGGCGCTGGC ACAGGAAAAT
GAATAA
|
|---|
| Protein sequence | MVCSSQLVPQ IQGWARELGF SQIKVAGVDL SSAEPGLMQW LAQGFHGEMH YMAAHGLKRA
RPAELVPGTV SVITARMDYL PRATALEAAE GWQAIELGRL ARPTEAVVSV YARGRDYHKV
LRARLQKLSD RVAEAVGPFG HRVFTDSAPV LEAELARRSG QGWRGKHTLV LSREAGSMFF
LGEIYVDMPL EPTEPVTHHC GSCQACIDVC PTQAIIAPYR LDARRCISYL TIEHAGPIPL
ELRPLMGNRI YGCDDCQLIC PWNKFAQTSS LPDFDVRAGL VGQQLVHLFT WDEETFLRMT
EGGPIRRIGH ERWLRNIAVA LGNALRATRD PVVRAALAAR ANDPSPLVRE HVAWALAQEN
E
|
|---|
| |