Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0983 |
Symbol | |
ID | 4674005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1023439 |
End bp | 1024887 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639838107 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_985299 |
Protein GI | 121593403 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.951769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATG CCCGCCGCCC TTCCCCCCTT CACAGCCGCC GCACCCTGCT GCGCGCGGGT AGCCTGGTAC TGCTGCTGGG CACGCAGCAG ATCGCGCGCG GCGCCACCAT CGTCGCGGTG CGTGTCTGGC CCGCGCCCGA CTATTCACGG GTGACCATCG AATCCGACCG TGCGCTCACG GCCCGCCAGA CCTTCGTGGA CACGCCGCCG CGCCTGGCGG TGGACATCGA GGGCATCGAC CTCAACCCCT CGCTGCGCGA ACTGGTCGCC AAGGTGCGCG CAGACGACCC CAACATCGCC GGCATCCGCG TGGGCCAGAA CGCGCCCGGC GTGGTGCGCC TGGTGGTGGA CCTGAAGCAG GCGGCGCGGC CGCAGGTCTT CACGCTGCAG CCCGTGGCCG CATACCAGCA CCGGCTGGTG TTCGACCTGT ATCCCGCGCA GCCGCCCGAC CCGCTGGAGG CACTGATCGC CGAGCGGCTG CGCGACGCCA CCGCGCCGCT GCCCGGCAGC GCTGGTACAG GGCGCGCCAT GGCAGTCACC CCATTGACGG ACCCGCTGGG TGACCTGATC GCACGGCATT CCGCACCGCA GGCCATGCCC CCTGCCCTGC CCGTGCCGGG CACGGCGGTG GCAACCGCAC CCGTGGCGCC GGCACCCGCC GCCCCGGCGC GCCCTGCCGC GCCCGCCACC CCGCCTACGA CGGCCCGCGC GGCGTATTCC ACCGACCGCC TCATCATCAT CGCGCTGGAC CCCGGCCACG GCGGCGAAGA CCCGGGCGCC ATCGGACCGC GCGGCACGCG CGAAAAGGAC GTGGTGCTGA AAGTGGCGCA CCTGCTGCGC GACCGCATCA ATGCCACGCA GGTGGGCGGC AATCCCATGC GCGCCTTTCT CACGCGCGAC GGTGACTTCT TCGTCCCGCT GGCGGCGCGC GTGGACAAGG CGCGGCGCGT GCAGGCAGAC CTGTTCGTGT CCATCCACGC CGACGCCTTC ACCACCCCGT CGGCACGCGG CGCCAGCGTG TTCGCGCTGA GCCAGGGCGG CGCGTCCAGC TCGGCCGCGC GCTGGCTGGC CAACAAGGAG AACGAGGCCG ACCTGATCGG CGGCGTGAAC CTGGGCGCAC AACAGGACCG CCATGTGCAG CGCGCGCTGC TGGACATGAG CACCACGGCG CAGATCAACG ACAGCCTCAA GCTCGGCAGC GTGCTGCTGG GCGAGATCGG CGGCATGGCC AAGCTGCACA AGCCGCGCGT GGAGCAGGCA GGCTTTGCCG TGCTCAAGGC GCCCGACATT CCCAGCGTGC TGGTGGAGAC GGCCTTCATC AGCAACCCCG AGGAAGAGTC CAAGCTGCGG TCCGCCGCGT ATCAAGAGCA ATTGGCCGAC GCGCTGATGC GCGGCATCGT CCGATACTTC GCGAAAAACC CGCCGCTGGC GCGCAGCCGC ACCGTCTGA
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Protein sequence | MSDARRPSPL HSRRTLLRAG SLVLLLGTQQ IARGATIVAV RVWPAPDYSR VTIESDRALT ARQTFVDTPP RLAVDIEGID LNPSLRELVA KVRADDPNIA GIRVGQNAPG VVRLVVDLKQ AARPQVFTLQ PVAAYQHRLV FDLYPAQPPD PLEALIAERL RDATAPLPGS AGTGRAMAVT PLTDPLGDLI ARHSAPQAMP PALPVPGTAV ATAPVAPAPA APARPAAPAT PPTTARAAYS TDRLIIIALD PGHGGEDPGA IGPRGTREKD VVLKVAHLLR DRINATQVGG NPMRAFLTRD GDFFVPLAAR VDKARRVQAD LFVSIHADAF TTPSARGASV FALSQGGASS SAARWLANKE NEADLIGGVN LGAQQDRHVQ RALLDMSTTA QINDSLKLGS VLLGEIGGMA KLHKPRVEQA GFAVLKAPDI PSVLVETAFI SNPEEESKLR SAAYQEQLAD ALMRGIVRYF AKNPPLARSR TV
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