Gene Ajs_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0983 
Symbol 
ID4674005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1023439 
End bp1024887 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content72% 
IMG OID639838107 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_985299 
Protein GI121593403 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.951769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG CCCGCCGCCC TTCCCCCCTT CACAGCCGCC GCACCCTGCT GCGCGCGGGT 
AGCCTGGTAC TGCTGCTGGG CACGCAGCAG ATCGCGCGCG GCGCCACCAT CGTCGCGGTG
CGTGTCTGGC CCGCGCCCGA CTATTCACGG GTGACCATCG AATCCGACCG TGCGCTCACG
GCCCGCCAGA CCTTCGTGGA CACGCCGCCG CGCCTGGCGG TGGACATCGA GGGCATCGAC
CTCAACCCCT CGCTGCGCGA ACTGGTCGCC AAGGTGCGCG CAGACGACCC CAACATCGCC
GGCATCCGCG TGGGCCAGAA CGCGCCCGGC GTGGTGCGCC TGGTGGTGGA CCTGAAGCAG
GCGGCGCGGC CGCAGGTCTT CACGCTGCAG CCCGTGGCCG CATACCAGCA CCGGCTGGTG
TTCGACCTGT ATCCCGCGCA GCCGCCCGAC CCGCTGGAGG CACTGATCGC CGAGCGGCTG
CGCGACGCCA CCGCGCCGCT GCCCGGCAGC GCTGGTACAG GGCGCGCCAT GGCAGTCACC
CCATTGACGG ACCCGCTGGG TGACCTGATC GCACGGCATT CCGCACCGCA GGCCATGCCC
CCTGCCCTGC CCGTGCCGGG CACGGCGGTG GCAACCGCAC CCGTGGCGCC GGCACCCGCC
GCCCCGGCGC GCCCTGCCGC GCCCGCCACC CCGCCTACGA CGGCCCGCGC GGCGTATTCC
ACCGACCGCC TCATCATCAT CGCGCTGGAC CCCGGCCACG GCGGCGAAGA CCCGGGCGCC
ATCGGACCGC GCGGCACGCG CGAAAAGGAC GTGGTGCTGA AAGTGGCGCA CCTGCTGCGC
GACCGCATCA ATGCCACGCA GGTGGGCGGC AATCCCATGC GCGCCTTTCT CACGCGCGAC
GGTGACTTCT TCGTCCCGCT GGCGGCGCGC GTGGACAAGG CGCGGCGCGT GCAGGCAGAC
CTGTTCGTGT CCATCCACGC CGACGCCTTC ACCACCCCGT CGGCACGCGG CGCCAGCGTG
TTCGCGCTGA GCCAGGGCGG CGCGTCCAGC TCGGCCGCGC GCTGGCTGGC CAACAAGGAG
AACGAGGCCG ACCTGATCGG CGGCGTGAAC CTGGGCGCAC AACAGGACCG CCATGTGCAG
CGCGCGCTGC TGGACATGAG CACCACGGCG CAGATCAACG ACAGCCTCAA GCTCGGCAGC
GTGCTGCTGG GCGAGATCGG CGGCATGGCC AAGCTGCACA AGCCGCGCGT GGAGCAGGCA
GGCTTTGCCG TGCTCAAGGC GCCCGACATT CCCAGCGTGC TGGTGGAGAC GGCCTTCATC
AGCAACCCCG AGGAAGAGTC CAAGCTGCGG TCCGCCGCGT ATCAAGAGCA ATTGGCCGAC
GCGCTGATGC GCGGCATCGT CCGATACTTC GCGAAAAACC CGCCGCTGGC GCGCAGCCGC
ACCGTCTGA
 
Protein sequence
MSDARRPSPL HSRRTLLRAG SLVLLLGTQQ IARGATIVAV RVWPAPDYSR VTIESDRALT 
ARQTFVDTPP RLAVDIEGID LNPSLRELVA KVRADDPNIA GIRVGQNAPG VVRLVVDLKQ
AARPQVFTLQ PVAAYQHRLV FDLYPAQPPD PLEALIAERL RDATAPLPGS AGTGRAMAVT
PLTDPLGDLI ARHSAPQAMP PALPVPGTAV ATAPVAPAPA APARPAAPAT PPTTARAAYS
TDRLIIIALD PGHGGEDPGA IGPRGTREKD VVLKVAHLLR DRINATQVGG NPMRAFLTRD
GDFFVPLAAR VDKARRVQAD LFVSIHADAF TTPSARGASV FALSQGGASS SAARWLANKE
NEADLIGGVN LGAQQDRHVQ RALLDMSTTA QINDSLKLGS VLLGEIGGMA KLHKPRVEQA
GFAVLKAPDI PSVLVETAFI SNPEEESKLR SAAYQEQLAD ALMRGIVRYF AKNPPLARSR
TV