| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0964 |
|---|
| Symbol | |
|---|
| ID | 4673861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1005658 |
|---|
| End bp | 1006734 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639838088 |
|---|
| Product | respiratory-chain NADH dehydrogenase, subunit 1 |
|---|
| Protein accession | YP_985280 |
|---|
| Protein GI | 121593384 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.890655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0815435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG CAATCTACAA CGGCGGCCTG AACCTGGTCG CCGCCTCATG GTGGACCGGC
GCGGCCTGGC CCGTCATCTG GAATCTCATC AAGATCATCT GCGTCGTATT GCCGCTGCTG
GGGGCCGTGG CCTATCTGAC GCTGTGGGAA CGCAAGCTGC TGGGGTTCAT GCAGGTGCGC
TTCGGGCCCA ACCGCGTCGG GCCCTTCGGC TTGCTGCAGC CGATTGCCGA CGCCCTGAAG
CTGCTGACCA AGGAGCTGAT CCAGCCTGCG GCGGCTGCCA AGGGTCTGTT CTATCTCGGC
CCGGTGATGG CCATCATGCC CGCGCTGGGC GCATGGGCGG TGATCCCCTT CGGGCCGGAT
CTGGCGCTTG CCAATGTCAA CGCGGGCCTG CTGCTGGTCA TGGCCATCAC CTCCATCGAG
GTGTATGGCG TGATCATTGC CGGGTGGGCC TCCAACTCCA AGTACGCCTT CCTGGGGGCC
TTGCGTGCCT CGGCCCAGAT GGTCAGCTAT GAAATCGCCA TGGGTTTTTG CTTCCTGGTC
GTCATCATGG TGTCGGGCAG CATGAACCTG ACCGAGATCG TGGCCGTCCA GGGGCGCGGC
ACCATGACGG ACATGGGGCT GGGCTTCCTG TCCTGGAACT GGCTGCCGTT GTTCCCCATC
TTCATCGTTT ACCTGATCTC CGTGGTTGCC GAGGTGAACC GCCACCCGTT CGACGTGGTC
GAGGGCGAGG CGGAAATCGT GGCGGGCCAC ATGGTCGAGT ACTCGGGCAT GGGCTTTGCC
ATCTTCTTCT TGGCAGAATA CGCCAGCATG TGGCTGGTCT CCATCCTGGC CGTGGTGATG
TTCCTCGGGG GCTGGCTGCC GCCCTTCGAT GCGCTCGGCT TCATCCCGGG CTGGATCTGG
CTGGGCATCA AGACCTTCCT GGTGGTATCC ATGTTCATCT GGATTCGGGC CACCTTCCCG
CGCTTCCGCT ATGACCAGAT CATGCGTCTG GGTTGGAAGA TCTTCATTCC GGTCACCCTG
GTGTGGCTGC TGGTCGTGGG CGCATGGTTG CTGTCGCCCT GGAACATCTG GAAATAA
|
|---|
| Protein sequence | MIDAIYNGGL NLVAASWWTG AAWPVIWNLI KIICVVLPLL GAVAYLTLWE RKLLGFMQVR
FGPNRVGPFG LLQPIADALK LLTKELIQPA AAAKGLFYLG PVMAIMPALG AWAVIPFGPD
LALANVNAGL LLVMAITSIE VYGVIIAGWA SNSKYAFLGA LRASAQMVSY EIAMGFCFLV
VIMVSGSMNL TEIVAVQGRG TMTDMGLGFL SWNWLPLFPI FIVYLISVVA EVNRHPFDVV
EGEAEIVAGH MVEYSGMGFA IFFLAEYASM WLVSILAVVM FLGGWLPPFD ALGFIPGWIW
LGIKTFLVVS MFIWIRATFP RFRYDQIMRL GWKIFIPVTL VWLLVVGAWL LSPWNIWK
|
|---|
| |