Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0962 |
Symbol | |
ID | 4673879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1002137 |
End bp | 1003498 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639838086 |
Product | NADH-quinone oxidoreductase, F subunit |
Protein accession | YP_985278 |
Protein GI | 121593382 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0089517 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCACGG CTGCACAAGT GCTGTCGCAG TTTCAGGCGA CGGGCGTACA GACCTGCTTC CATGACCGCC ATATCAATCC GCAGATCTAT GCGGGCTTGA ACGGCAGCAA CTGGAGCCTC AAGGATTACG AGGCCCGGGG AGGCTACCAG GCCCTGCGCA AGCTGCTGGG CAAGGATGGT GGTGAAGGCC TGACCCAGGA CCAGGTGATC GCCACCATGA AGGAATCCGG TCTGCGCGGC CGTGGTGGTG CGGGCTTCCC GACTGGCCTG AAGTGGAGCT TCATGCCGCG TCAGTTCCCT GGCCAGAAAT ACTTGGTCTG CAATTCCGAC GAGGGGGAGC CGGGCACGTG CAAGGATCGC GACATCCTGA TGTACAACCC GCACATCGTG ATCGAGGGCA TGATCATCGC GGCCTACGCG ATGGGCATCT CTGTGGGCTA CAACTACATC CACGGCGAGA TCTTCCAGGT CTACGAGCGC TTTGAAGCGG CGTTGGAAGA GGCGCGCGCT GCGGGCTATC TGGGTGACAA CATCCTGGGC AGCAGCTTCA GCTTTCAGCT GCATGCGCAC CATGGCTTTG GGGCGTATAT CTGCGGCGAG GAAACGGCGT TGCTGGAATC GCTGGAAGGC AAGAAGGGCC AGCCGCGTTT CAAGCCCCCA TTCCCGGCCA GCTTTGGCCT GTACGGTAAA CCCACCACGA TCAACAACAC CGAGACGTTC GCCGCGGTGC CGTGGATCAT CCGCAATGGC GGTCAGGCAT ACCTCGAGTG TGGCAAGCCC AACAACGGTG GCACCAAGAT CTTCTCGGTG TCCGGCGACG TAGAGCGTCC AGGCAACTAT GAAGTGCCCC TGGGCACGCC ATTTGCCAAG CTGCTGGAAC TGGCGGGTGG CGTGCGCAAG GGTCGCCAGC TCAAGGCGGT GATTCCGGGC GGTTCTTCCG CTCCCGTGTT GCCGGCGTCC ATCATCATGG AATGCACGAT GGACTACGAC TCCATCGCCA AGGCCGGCTC CATGCTGGGC TCGGGCGCCG TGATCGTGAT GGACGATTCC CGCAACATGG TGGAGAGCCT GCTGCGCCTG TCGTATTTCT ACGCGCATGA ATCCTGCGGT CAGTGCACAC CCTGCCGCGA AGGCACGGGC TGGATGTGGC GCGTGATCAA TCGTATCCAG CACGAAGCCG GGCGGGAGAG CGATCTGGAC CTGCTCAATT CCGTCGCGGA CAACATTCAG GGCCGGACCA TCTGCGCGCT GGGCGATTCG GCAGCCATGC CGGTGCGCGC CATGCTCAAG CATTTCCGTC CGGAGTTTGA AGCGCTGATC CGAAACGCCC ACCCATCGGG TTCCACCCCC GCCAGCGCCT GA
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Protein sequence | MTTAAQVLSQ FQATGVQTCF HDRHINPQIY AGLNGSNWSL KDYEARGGYQ ALRKLLGKDG GEGLTQDQVI ATMKESGLRG RGGAGFPTGL KWSFMPRQFP GQKYLVCNSD EGEPGTCKDR DILMYNPHIV IEGMIIAAYA MGISVGYNYI HGEIFQVYER FEAALEEARA AGYLGDNILG SSFSFQLHAH HGFGAYICGE ETALLESLEG KKGQPRFKPP FPASFGLYGK PTTINNTETF AAVPWIIRNG GQAYLECGKP NNGGTKIFSV SGDVERPGNY EVPLGTPFAK LLELAGGVRK GRQLKAVIPG GSSAPVLPAS IIMECTMDYD SIAKAGSMLG SGAVIVMDDS RNMVESLLRL SYFYAHESCG QCTPCREGTG WMWRVINRIQ HEAGRESDLD LLNSVADNIQ GRTICALGDS AAMPVRAMLK HFRPEFEALI RNAHPSGSTP ASA
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