Gene Ajs_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0956 
Symbol 
ID4673037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp998220 
End bp998600 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content65% 
IMG OID639838079 
Productprotein translocase subunit secG 
Protein accessionYP_985272 
Protein GI121593376 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1314] Preprotein translocase subunit SecG 
TIGRFAM ID[TIGR00810] protein translocase, SecG subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000247641 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGACTGG TTGTGAACGT GATTCTGGCG GTGCAGATGC TGACCGCCCT CGGGATGATT 
GGGTTGATCC TGATCCAGCA CGGTAAGGGT GCGGACATGG GGGCAGCCTT CGGTAGTGGC
AGTTCCGGCA GCTTGTTTGG GGCCAGCGGC AGCGCCAACT TCCTTTCGCG CACCACGGCG
GTCCTGGCGA CGGTGTTCTT CGTGGCAACC CTGGCATTGG CATACTTTGG CAACCAGCGT
CCGGTGAGCA CTGGTAGTGT TCTGGAGACG CCCGCAGTAG CTGTCCCCGC CTCGACGGCA
CCTGCGGTCG ATGCCTCTGC GGCAGCTCCA GCGCCGGCGG TGGAGCCTGC CTCGGGCGCC
GCTCAGATCC CGACCAAGTG A
 
Protein sequence
MGLVVNVILA VQMLTALGMI GLILIQHGKG ADMGAAFGSG SSGSLFGASG SANFLSRTTA 
VLATVFFVAT LALAYFGNQR PVSTGSVLET PAVAVPASTA PAVDASAAAP APAVEPASGA
AQIPTK