| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0949 |
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| Symbol | |
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| ID | 4673198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 990001 |
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| End bp | 992265 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639838071 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_985265 |
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| Protein GI | 121593369 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.180446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000000935838 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGTCG TGTTGAACAA GGCAGCTGTT GACAATCCGC AGGCCGTCCC TGTGGCGGTT
GACAGTTCTT CTGCTGCGGC CGCCAACGCC GCGGCGGCGA GCTTTGCTGC GCTGCTGGAA
AAACTCGACT ACCTTGACGA AGCCAGCGTC GAGCAGGTGC GCCAGGCGTA CCGTTACGCC
GATGAAGCGC ACTTGGGGCA GTTGCGCAGC AGTGGCGAGC CCTACATCAC GCACCCGATT
GCCGTGGCGG CGCTGTGCGC GAGCTGGAAG CTGGATGTCC AGGCCCTCAT GGCAGCCTTG
CTGCACGACG CCATGGAAGA TTGCGGCATC ACCAAGTCCG ATCTCATCGA CCGGTTTGGT
GCGCCTGTTG CGGAACTGGT GGATGGTCTC ACCAAGCTCG ATAAGCTGCA GTTCAATACC
CGTGAGGAGA ACCAGGCCGA GTCGTTTCGC AAGATGCTGC TGGCCATGGC ACGCGACGTG
CGCGTCATCC TCATCAAGCT GGCGGACCGC ACGCACAATA TGCGCACGCT CTCCGACATG
CCGCGCAGCA AGTGGGGTCG CATTTCGTCG GAGACGCTGG AGATCTATGC GCCCATCGCG
CATCGGTTAG GGCTGAACCA GACCTACCGC GAACTGCAGG ACCTCGCCTT TCGCCACCTG
CATCCATGGC GCTATGCCAC GCTGTCCAAA GCGGTCACGA AGTCGCGCAA CCGACGCCGC
GACATCGTGC AGAAGGTGCA GACGGAAGTG GATGCCGCAT TTGCGCGGCT GGGCATGCAC
GTGCGGCTGG CGGGGCGTGA GAAGACACTC TTTGCGATCT ACCAGAAGAT GATCACCAAG
CACCTGAGCT TTGCGCAGGT GACGGATCTC TATGGCTTCC GTGTCATCGT GCATTCGGTG
ACGGACTGCT ATACCGCCTT GGGTGTGTTG CACCAGATGT ACAAACCGGT GCCCGGCAAG
TTCAAGGACC ATATCGCCAT TGGCAAGCTC AATGGCTATC AGTCGCTGCA TACGACGCTG
GTGGGACCTG CTGGCCTGAA CATCGAGTTT CAGGTTCGCA CCGAGGAAAT GCACATCGTG
GCGGAAGCGG GTGTGGCGGC GCACTGGCTC TACAAGGCGA AAGATGCGGA TGGCGCGGTG
GCAGAACGCC TGGGCACCAA ATGGCTGCAG TCCTTGCTCG ACATCCAGAA TGAAACGCGC
GACGCGGCCG AATTCTGGGA CCACGTCAAG GTGGACCTGT TCCCAGATGC CGTCTATGTC
TTCACGCCCA AGAGCCAGAT CATGGCCTTG CCCCGCGGAG CCACTGCGGT GGACTTTGCC
TATGCGATCC ACAGCGACGT GGGCGACCGC ACCACGGCGG CGCGCATCAA CAACGAACAG
GTGCCCCTGC GCACCGAACT CAAGAACGGG GATGTGGTGG AAATCGTTAC CACACAGGGC
GCCCGGCCCA ACCCGGCTTG GCTGGGGTTC GTGCGCACAG GGCGCGCGCG TTCCAAGATT
CGCCACTATC TCAAGACGCT GGCGCAGAAC GAGTCGGCGG GCCTGGGCGA GAAACTGCTG
ACCCAGGCGC TGCGCGCCGA GGGCATCGAA CAACTGCCTG ACGTGCAGAC CCAAGCGCCC
ATTTGGGAAA AACTGCTGCG CTTTACGGGC AATCGCAGCC GCGCGGAACT CATGACCGAT
GTGGGACTGG GCAAGCGCAT TGCCGGCATC GTGGCCAAGC GCCTGGTCGT GTTGCTATCG
GAAGACGGCC AGCGGCCTGA TGCATTGCTG CTGACCCGCG AGCGCTACAG CTCCCATGAA
ACAGTCTCGC AAGGGAGCAT CACCCTCGAC GGCAGCGAGA ATGCATCTGT TCAATATGCA
GCGTGTTGCC GCCCGGTGCC GGGTGACCCC ATCGTGGGAT ACCTGGGCCG CGGCGAGGGC
CTGGTGGTCC ATCACGCGCA ATGCGGGGTA GCCAAGAAAC TGCAGCACAA AGATGGCGAG
CGCTTCATTG CCGTCGACTG GTCCGATGAG CCTACCCGCC AATTCGAGAC CGGTATCACC
GTGACCGTGA CCAATGGCAA GGGCGTACTG GCTCGCATCG CATCCGAATT TGCCAACTCA
GAGGCAGATA TCGTCCGTGT GGACATGGAC GATGCGATGG ACACCACTGA TCTGCGTTTT
GTGGCAGCGG TGCGTGATCA ACACCATGTA GAGGCCGTGT TGCGCAATCT GCGCCGCACG
CATTCCGTAT TGCGAGCGTT CCGCGTGCTT CCCCAGCCCG CTTGA
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| Protein sequence | MNVVLNKAAV DNPQAVPVAV DSSSAAAANA AAASFAALLE KLDYLDEASV EQVRQAYRYA
DEAHLGQLRS SGEPYITHPI AVAALCASWK LDVQALMAAL LHDAMEDCGI TKSDLIDRFG
APVAELVDGL TKLDKLQFNT REENQAESFR KMLLAMARDV RVILIKLADR THNMRTLSDM
PRSKWGRISS ETLEIYAPIA HRLGLNQTYR ELQDLAFRHL HPWRYATLSK AVTKSRNRRR
DIVQKVQTEV DAAFARLGMH VRLAGREKTL FAIYQKMITK HLSFAQVTDL YGFRVIVHSV
TDCYTALGVL HQMYKPVPGK FKDHIAIGKL NGYQSLHTTL VGPAGLNIEF QVRTEEMHIV
AEAGVAAHWL YKAKDADGAV AERLGTKWLQ SLLDIQNETR DAAEFWDHVK VDLFPDAVYV
FTPKSQIMAL PRGATAVDFA YAIHSDVGDR TTAARINNEQ VPLRTELKNG DVVEIVTTQG
ARPNPAWLGF VRTGRARSKI RHYLKTLAQN ESAGLGEKLL TQALRAEGIE QLPDVQTQAP
IWEKLLRFTG NRSRAELMTD VGLGKRIAGI VAKRLVVLLS EDGQRPDALL LTRERYSSHE
TVSQGSITLD GSENASVQYA ACCRPVPGDP IVGYLGRGEG LVVHHAQCGV AKKLQHKDGE
RFIAVDWSDE PTRQFETGIT VTVTNGKGVL ARIASEFANS EADIVRVDMD DAMDTTDLRF
VAAVRDQHHV EAVLRNLRRT HSVLRAFRVL PQPA
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