| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0927 |
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| Symbol | |
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| ID | 4672053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 974991 |
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| End bp | 976268 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639838049 |
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| Product | phage integrase family protein |
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| Protein accession | YP_985243 |
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| Protein GI | 121593347 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000881827 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCAAAC TGTCAGACGT GCAAATACGG GCCTGGATCA AGGCCGGAGA ACGATTCGAG
GGGCGTGCCG ACGGCGACGG CCTGTACCTG CGCTGGCGCC CCAGCGTGCC GACGCCAGAG
TGGAGGTTCC GCTACCAGTT CGACCGCAAG CCCCGCGTGA TGAGCCTGGG CACCTACGGC
GTGCTGTCCC TGGCCGAGGC ACGCCGCACC GCCAAGGAAC TCTCTGCCCG CGTAGCCCTG
GGGTACGACG TTGCCAGTGA AAAGCAAGAC CGTATCCGCG AAACCGCCGA GCGGATAGAG
GCCGACCGCA GCGCCTGGAC GGTGGCCGAC ATGGCCGACG CCTATTTCCG CGACAAGATC
ATGGGACACT GGAAGCACCC CAACATCGTC CGCTCGCGCA TCGAGAACGA CATCAAGCCG
CGCATCGGCA AAATGAAGAT CGAGGACGTG ACGACCACGG ACATTGATGA CGTGCTGAAG
TCCATCATCA AGCGCGGCGC GCCGACCGTC GCCAGCGACG TGCTGCGCTG GCTGAAGCGG
ATGTTCAACT ACGCGATCAA GCAACGGCCC AAACAGCTCC AGCGCAATCC GGCTCTTCCC
TTCGATATCA ACGACGCCGG CGGCAAGGAA GAAAGCCGCG ACCGTTGGCT GAGCCGGGAT
GAACTGTGCC GGCTGTTCGA GGCAATGAGG GAAGCCGCTG GCCGGTTCAC CATCGAGAAC
CACTGCGCCA TACGTCTGCT TCTGCTGCTG GCTGTTCGCA AGGAAGAATT GCTCGCCGCC
CCTTGGGCCG AGTTCGACTT GGACACCGGG GTATGGCACC TGCCCGCCGG GCGCACGAAA
ACCGGCGCAG CCACCGACAT CCCCTTGTCT CCCTATGCCT TGGAAATCCT GCGCGAGCTG
CAACGGCTGG CCGCCGGTAG CGCCTGGGTA TTCCCTGCCG TGAAAATGCA AACCCGGATG
ACGCCGCACC GCGACCCCAA CACATTGAAC GCGGCCTTCT CCAAGCACAT CCGCCCCTTG
CTGCCTGACG TGCCGCACTT CGTCATCCAT GACCTGCGGC GCACGGCCCG CACGCACCTG
TCGGCGCTTG GCGTAGAGCC GCATATTGCC GAGCGATGCC TCAACCACAA GCAGAGGGGC
GTGAAAGGCA TCTATGACCG GCACGCCTAC TTTGACGAAC GCAAGGCGGC ACTGAACGCA
TGGGCTTCCC TGCTTCAGCA GATCGAAATG GGCAACGTGC AGCCTAACGT GCTTCCCTTG
CGAAAGGCTG CGGCATGA
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| Protein sequence | MGKLSDVQIR AWIKAGERFE GRADGDGLYL RWRPSVPTPE WRFRYQFDRK PRVMSLGTYG
VLSLAEARRT AKELSARVAL GYDVASEKQD RIRETAERIE ADRSAWTVAD MADAYFRDKI
MGHWKHPNIV RSRIENDIKP RIGKMKIEDV TTTDIDDVLK SIIKRGAPTV ASDVLRWLKR
MFNYAIKQRP KQLQRNPALP FDINDAGGKE ESRDRWLSRD ELCRLFEAMR EAAGRFTIEN
HCAIRLLLLL AVRKEELLAA PWAEFDLDTG VWHLPAGRTK TGAATDIPLS PYALEILREL
QRLAAGSAWV FPAVKMQTRM TPHRDPNTLN AAFSKHIRPL LPDVPHFVIH DLRRTARTHL
SALGVEPHIA ERCLNHKQRG VKGIYDRHAY FDERKAALNA WASLLQQIEM GNVQPNVLPL
RKAAA
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