| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0907 |
|---|
| Symbol | |
|---|
| ID | 4671938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 958305 |
|---|
| End bp | 959219 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639838031 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_985225 |
|---|
| Protein GI | 121593329 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCCT ACATCGACCG CCACCGTGAT GACTACGGGG TCGAGCCCAT CTGCCGGGCG
CTGCAGATGG CCCCGTCGTG TTACTGGCGC CACGCAGCCC GGCAACGCAA CGCGCAACTG
CGCAGTGCAC GCGCCCAGCG TGACGAGGGT TTGAAGGCCG ACATTCAGCG CGTGTGGCAC
GCCAACTGGC AGGTCTACGG AGCCGACAAG GTCTGGCTGC AGATGAACCG CGAGGGCATC
GTGGTGGCGC GCTGCACGGT CGAGCGTCTG ATGCGTGCCA TGGGCTTGCA AGGGGCACGC
CGTGGCAGGG CGGTGCGCAC CACCACGCCG GATACCTCGG CCCCGTGCCC GCTGGACCAC
GTCAACCGGC ACTTCCATGC CAGCCGTCCC AACGAGCTAT GGGTGTCGGA CTTCACCTAT
GTCTCCACCT GGCAAGGCTG GTTGTATGTG GCCTTTGTGG TGGATGTGTA CGCTCGGCGC
ATCGTGGGCT GGCGCGTCAG TCGCAGCATG CAGACGGACT TCGTGCTCGA TGCCCTGGAG
CAGGCTCTGT ACGAACGCCA GCCAGCGGCC CATGTCTTGA CGCACCATTC CGACAGGGGC
AGTCAGTACG TCAGCATCCG CTACACCGAA CGCTTGGACC AGGCGGGCAT ACAACCTTCG
GTGGGCAGCA GGGGAGACAG CTATGACAAC GCGCTGGCCG AGACCATCAA CGGTCTGTAC
AAGGCCGAGT TGATTCACCG CCGGGGACCT TGGAAGACCA GGGAATCCGT GGAACTGGCC
ACCCTGCAAT GGGTGCACTG GTTCAACCAC GTCCGACTGC TCACGCCGAT TGGGGGCATC
CCTCCGGCAG AAGCTGAGGC AAACTACTGG AGGCAACTCG CCGCCAGCGA CACCTCGACA
GAAGTGTCAA CTTAA
|
|---|
| Protein sequence | MKAYIDRHRD DYGVEPICRA LQMAPSCYWR HAARQRNAQL RSARAQRDEG LKADIQRVWH
ANWQVYGADK VWLQMNREGI VVARCTVERL MRAMGLQGAR RGRAVRTTTP DTSAPCPLDH
VNRHFHASRP NELWVSDFTY VSTWQGWLYV AFVVDVYARR IVGWRVSRSM QTDFVLDALE
QALYERQPAA HVLTHHSDRG SQYVSIRYTE RLDQAGIQPS VGSRGDSYDN ALAETINGLY
KAELIHRRGP WKTRESVELA TLQWVHWFNH VRLLTPIGGI PPAEAEANYW RQLAASDTST
EVST
|
|---|
| |