Gene Ajs_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0903 
Symbol 
ID4671179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp953128 
End bp954792 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content70% 
IMG OID639838027 
ProductDNA repair protein RecN 
Protein accessionYP_985221 
Protein GI121593325 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGA GGCGGATCGC CCTGAGCGAT TTCGTGATCG TGCGATCGCT CGAGCTGGAC 
CTGCATGCCG GCTTCACCGT GCTCACCGGT GAAACCGGAG CCGGCAAGTC GATCCTGATC
GACGCGTTGC AACTGGTGCT GGGCGCGCGT GCCGACTCCG GTGTGATCCG CGAAGGCGCG
CAGCGCACCG ACGTCTGCGC CGAATTCGAC GGTGGCACCA TCGCGCTGGC AGCCTGGCTG
GACGAGGCGG GCTTTCCGCG CGACGACACG CTGCTGCTGC GCCGCACCGT CGATGTGCAA
GGCAAGAGCC GCGCCTGGAT CAACGGCATC CCCGCCACGG CAGCGCAGAT GCGTGCCGTG
GGCGAGCATC TGCTGGACAT TCATGGGCAG CACGCCTGGC AGAGCCTGAC GCGGCCCGAC
GCCGTGCGCG GCCTGCTGGA CGCCTATGCC GGCGTGCAGG TGCAACCCTT GGCCGCGCTG
TGGACGAGTT GGCGCGACGC GCAGCAGGCG CTGACCCACG CCCGCGCTGC TCAGGACACG
CTGCAACAGG AACGCGAGCG CCTGCAGTGG CAGATCGGCG AAGTGGACAA GCTGGCGCCG
CGCGATGGCG AATGGGAGGA ACTCAATGCC GAGCATGCGC GACTGTCCAA CGCCCAGTCG
CTGCTGGACA ACGCCCAGGC CGCCCTGAGT GTGCTGGAGG ACGAAGACGC GGGCGGCGCG
CTGCGGGCCC TGGCGCAGGC ACAGCACCTG CTGCAGGACT ACGAGCATGT GGACCCGTCG
TTTCGCACCA TGAATGAGGT GCTGACCTCC TGCATCGCCC AGGCGGGCGA TGTGGCGCAC
TCTCTGCAAA GCTACCTGCG CCACGCCGAG CCCGACCCGG ATCGGCTGCA GCAGCTGGAC
GCCCGTGTAT CGCAGTGGAT GCAGCTCGCG CGCCGCTACA AGCGCACCCC ACCCGAACTA
CCCGCGCTGC TGCAAGACTG GAAGGACACG CTGCACCGTT TGGACAGCGC CACTGACCTG
GCCGCATTGC AGGCCGCCGA GCAAACCCAT GGCGCCGCTT ACCAGAAGGC CGCACGCGCC
CTGTCGCAAA AGCGCGCCAA GGCTGCGCCG CAACTGGCGC AGGCCATCAC CCGCGCCATG
CAGGGCCTGG GCATGGCGGG CGGGCGCTTC GAGGTGCAAC TGGACAAGGC CGAGCCTGGG
CCGCACGGCA TCGACCAGGT GGCGTTCCTG GTCAGCAGCC ACCCGGGCAT GACGCCGCGG
CCCATCGGCA AGGTGGCGTC GGGGGGCGAG CTGTCGCGCA TGGCGCTGGC GATCTCGGTC
ACCACCAGCG AGCTGGGCGA GGCGCCCACA CTGATCTTTG ACGAGGTGGA CTCGGGCGTG
GGCGGCGCCG TGGCGGAGAC CGTGGGCCGT CTGATGCAGC AGCTCGGGAC GGCCCGGCAG
GTACTGGCCG TCACCCACCT GCCCCAGGTG GCCGCGTGCG CGGACCATCA CCTTGTGGTG
GCCAAACACA AGCACGCCGA GGGCACCACC AGCAGCGTGG CCGCCGCCAA CGAGGAGGCG
CGCGTGGCCG AGATTGCGCG CATGCTGGGC GGCGAGCGTC TGTCCCCTAC CACCCTGGCG
CATGCACGCG AGATGCTGCA GGGCGCCGCC AAACCCACAG CCTGA
 
Protein sequence
MALRRIALSD FVIVRSLELD LHAGFTVLTG ETGAGKSILI DALQLVLGAR ADSGVIREGA 
QRTDVCAEFD GGTIALAAWL DEAGFPRDDT LLLRRTVDVQ GKSRAWINGI PATAAQMRAV
GEHLLDIHGQ HAWQSLTRPD AVRGLLDAYA GVQVQPLAAL WTSWRDAQQA LTHARAAQDT
LQQERERLQW QIGEVDKLAP RDGEWEELNA EHARLSNAQS LLDNAQAALS VLEDEDAGGA
LRALAQAQHL LQDYEHVDPS FRTMNEVLTS CIAQAGDVAH SLQSYLRHAE PDPDRLQQLD
ARVSQWMQLA RRYKRTPPEL PALLQDWKDT LHRLDSATDL AALQAAEQTH GAAYQKAARA
LSQKRAKAAP QLAQAITRAM QGLGMAGGRF EVQLDKAEPG PHGIDQVAFL VSSHPGMTPR
PIGKVASGGE LSRMALAISV TTSELGEAPT LIFDEVDSGV GGAVAETVGR LMQQLGTARQ
VLAVTHLPQV AACADHHLVV AKHKHAEGTT SSVAAANEEA RVAEIARMLG GERLSPTTLA
HAREMLQGAA KPTA