Gene Ajs_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0900 
Symbol 
ID4671138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp949098 
End bp951080 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content67% 
IMG OID639838024 
Producthypothetical protein 
Protein accessionYP_985218 
Protein GI121593322 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.347456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACCTT CATTCAACGA ACAGTTTGAC CAGCACGGCG CATGGAGGCG TGCTTTCGCC 
CAGCAACTCA AGCGCCTGGG GCAATGGATG GGTTCGCACG ACCTCATGGA CGCGGCTGTG
GAGGAGCGTC TGCAGCGGCT GGAAGAGCAG GTGCGCAGCG ACAAGGTGAC TGTCGCTTTT
GTGGCGGAGT TTTCGCGCGG CAAGTCCGAG CTCATCAATG CGATCTTCTT CGCCGGCTAT
GGCCGGCGCA TCATGCCGGC CAGTGCGGGG CGCACCACCA TGTGTCCGAC CGAGCTGGGC
TATGAAAACG GCACCGCCCC CAGCCTGCGC CTGCTGCCTA TCGACACGCG CATGCAGTCC
CTGGGGCTGG CCGAGTGGCG CCTGAAGGCA GACCGCTGGG TGAAGGTGCC GCTGGACATG
GACGACCCGG CCCAACTCGC CCAGGCGCTT GAAAAAGTAT CGGAAGTGCG CCGCGTGTCC
GTGGACGAGG CGCGTGCGCT GGGTTTCTGG AGCGATGAGG CCGCCGACGA GAACCCCGTG
CTGGACGCTG CGGGCATGGT CGAGGTGCCG ATGTGGCGGC ACGCGGTCAT CAACATTCCG
CATCCGCTGC TCAAGCAGGG GCTCGTGATT CTGGATACGC CGGGCCTGAA CGCCGTGGGC
GCGGAGCCCG AGCTCACCAT CAACCTCATC CCGCAGGCCC ACGCCGTGGT GTTCATCCTG
GGCGCGGACA CGGGCGTGAC GCGCTCGGAC CTGACCATCT GGCGCGACCA CCTGGGCACG
GCTGAAGACG CGACCGATGC GCGGCTGGTG GTGCTGAACA AGATCGACAC GCTGTGGGAC
ACGCTCAGTT CCCCGTCGCA AGTGCAAGCG CAGCTGGAGC GCCAGCGCCA GACATCGGCC
GAATTGCTGG GCGTGCCGCT CAGCCATGTC GTGCCCGTGT CGGCCCAGAA GGGCCTGGTG
GCCAAGATCA ACTGTGACGA CATCCTGCTG GAGTCCAGCG GGCTGCCGCT GCTGGAGGAA
GCGCTGGCCG AGGGCATCAT GGGCCGGCGC CAGGCCATCC TGCGGGCCAC GGTGGCCAGC
GGCGTGGCAA GCCTGCAGTC CGAGACGCGG CGGGTGATCA ACATCCGCCG GCGCGATCTG
GATGATCAGA TGCTGGAGTT GCGCAGCCTG CGCGGCAAAA ATGCCTCGGT GATCGACGCC
ATGCGCGGGC GCATCGAGCA GGAGCAGCAG GAGTTTGAAG CCAGCACGGC CAAGATCCAG
GCCGTGCGGG CAGTGCATCT GAAGATGCTG CGCGAGGTGT TCCACCAGCT TGGGCCGCGT
TCGCTCAAGG CGCAACTGGT GGAGCTCACC GAGGCGCTGC AGCCCAAGGG GCTCAAGCTG
GGCGTGCGCA AGGTATATGG CGACACCTTC GCCAAGGTGC GCACCATCAT GGAGGCCGCG
CAGTCCACGG GCATCGAGAT CCAGGCCATG CTGGGCGGCA CCTTCCGCCA GCTCAACACG
GAGTTCGGCT TCTCGTTGCA AGTACCTGCG GCGCCCCAAT TGGGTAACTA TGTGCAGGAG
ATCGTGGCCA TCGAGCAGCG GCACCTGCAA TACGTGAGCA TGGGCAACAC GCTGCGCCTG
GCGCAGCCGG AGTTCGCGCA GCGCTTGTTG CGGGCCATGG GCCTGCGCCT GCGCACCGTG
TTCGAGTCCG CGGCCAACGA GCTGGAGCTG TGGAGCAAGA CGGCCACGGC GCAGCTGGAC
GCGCAACTGC GTGAGCGCAA GCGCAGCTTC TCGCGGCGCA TCGAGGCGGT GAACCGCATC
CAGCAGGCCG CCAACGGGCT GGTGGACCGC ATCGCCGAGA TCGAAGAGGC CGAGCAGCAC
CTCGCCGAAC TGGAGCAGCG GCTGACGGAG CTGACCTCCG ACCTCGTGCG GCAGCCGCAA
GCGCCTGAGG GCGTGGACAT CGACATACCC CTTACCGAAC CCCAGCCGCT CGCGGCGTCA
TGA
 
Protein sequence
MGPSFNEQFD QHGAWRRAFA QQLKRLGQWM GSHDLMDAAV EERLQRLEEQ VRSDKVTVAF 
VAEFSRGKSE LINAIFFAGY GRRIMPASAG RTTMCPTELG YENGTAPSLR LLPIDTRMQS
LGLAEWRLKA DRWVKVPLDM DDPAQLAQAL EKVSEVRRVS VDEARALGFW SDEAADENPV
LDAAGMVEVP MWRHAVINIP HPLLKQGLVI LDTPGLNAVG AEPELTINLI PQAHAVVFIL
GADTGVTRSD LTIWRDHLGT AEDATDARLV VLNKIDTLWD TLSSPSQVQA QLERQRQTSA
ELLGVPLSHV VPVSAQKGLV AKINCDDILL ESSGLPLLEE ALAEGIMGRR QAILRATVAS
GVASLQSETR RVINIRRRDL DDQMLELRSL RGKNASVIDA MRGRIEQEQQ EFEASTAKIQ
AVRAVHLKML REVFHQLGPR SLKAQLVELT EALQPKGLKL GVRKVYGDTF AKVRTIMEAA
QSTGIEIQAM LGGTFRQLNT EFGFSLQVPA APQLGNYVQE IVAIEQRHLQ YVSMGNTLRL
AQPEFAQRLL RAMGLRLRTV FESAANELEL WSKTATAQLD AQLRERKRSF SRRIEAVNRI
QQAANGLVDR IAEIEEAEQH LAELEQRLTE LTSDLVRQPQ APEGVDIDIP LTEPQPLAAS