| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0899 |
|---|
| Symbol | |
|---|
| ID | 4671133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 948189 |
|---|
| End bp | 949004 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639838023 |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | YP_985217 |
|---|
| Protein GI | 121593321 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGC TGCCGGAGGT GGAAGTCACG CGGCGCAGCT TCGCTGGCGC GATCGAGGGC
GCAACTGTCC GCGGCATTAC GGTGGGCAAG CCCTTGCGCT GGCCGCTGGG CACGGAGCCC
GCAGTATTGG TCGGACGGCG CGTGTGCGGT GTGCGCCGGC GCGGCAAATA CCTGTTGCTG
GATCTGGATG AAGGGCTGCT GCTCATTCAC CTGGGCATGT CGGGCAGCTT GCGCTTTGCG
CGCGATCTGC CCGCGCGCGG CGCCCACGAT CATTTCGAAC TGATAACGGA CCAGGGCACG
CTGCGGCTGC ACGACCCGCG GCGCTTCGGC GCCGTGGTCT GGGCGGCGGG TGAGTCCGAT
CCCCGTGCAC GCAAGCTGCT CGATGGGTGG GGATTGGAGC CGCTGGGCGA GGACTTCGCC
TTCGAGACCT TCCACGCGGG GCTGCGCGCC AAACGCACGC CCATCAAGCA ACTGCTGCTC
GCGGGCACGG TGGTCGTGGG TGTGGGCAAT ATCTATGCCT GCGAGGTGCT GTTCCTCGCG
GGCATCCGGC CAACCACCCG CGCTTGCGCG ATCGGACCCC AGCGAGCCCG GCGCCTGCAC
GGCGCAATCC GCGAGGTGCT GGCGCGCGCG GTGGAGCGGG GCGGCAGCAC GCTGCGCGAT
TTCTCCAGCG CCGACGGCAG CGCCGGGCAT TTCCAATTGG AGGCCAATGT CTATGGCCGC
GCGGGCCTGC CGTGTCGCCA GTGCGGTACG CCCGTGCGTC TGTTGCGCCA GGGGCAGCGC
AGCACCTATT TCTGTCCGCA CTGCCAGCGC GCCTGA
|
|---|
| Protein sequence | MPELPEVEVT RRSFAGAIEG ATVRGITVGK PLRWPLGTEP AVLVGRRVCG VRRRGKYLLL
DLDEGLLLIH LGMSGSLRFA RDLPARGAHD HFELITDQGT LRLHDPRRFG AVVWAAGESD
PRARKLLDGW GLEPLGEDFA FETFHAGLRA KRTPIKQLLL AGTVVVGVGN IYACEVLFLA
GIRPTTRACA IGPQRARRLH GAIREVLARA VERGGSTLRD FSSADGSAGH FQLEANVYGR
AGLPCRQCGT PVRLLRQGQR STYFCPHCQR A
|
|---|
| |