| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0887 |
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| Symbol | |
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| ID | 4670652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 936531 |
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| End bp | 938021 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639838010 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_985205 |
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| Protein GI | 121593309 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.545524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACCC GCCGCACCGC CCTCGCCTCC GGCGCCCTGG CCACCGCCGC GCTGGCCACG
CCGCTGCACG CGCTGGCGCA GGGCAAGAAG GACGCCGTGA CGCTGGCCCT CGCCCTGGAG
CCGCCGGGGC TGGACCCCAC GGCCGGCGCG GCGTCCTCGA TTGCCGAGGT CACGCTCTAC
AACATCTACG AGACGCTCAC CAAGATCAAC CCGGACGGCA GCGTCTCGCC GCTGCTGGCC
GAGAGCTGGG AGGTCTCGCC CGACCTCAAG ACCTACACCT TCCGCCTGCG CAAGGGCGTC
ACCTTTCACA ACGGCGAGCC GCTCAATGCC GCGGCCGTGA AGTTCTCCTT CGACCGCGCG
GGCGGCGACA AGAGCACCAA CAAGGACAAG CGCAGCTTTG CCAACCTGAG CACGCAGGCG
GTGGACGAGT ACACCGTGGT GGTGCTCAAC AAGGACATCG ACCCCGACCT GCTGTTCGTG
CTGGGCCAGG CCACGGCCAT CATCGTGGAA CCCAAGAGCG CCGCCACCAA CGCCACCAAG
CCTGTGGGCA CGGGGCCCTA CAAGCTCGCC GGCTGGAGCC GCGGCGCCTC CATCACGCTG
GCCGCATGGC CGGGGTGGCG CCAGCCGTCC AGCATCCGCA TCCGCCGCGC CACGTTCCGC
TTCATTCCCG ATGCGGCGGC GCAGGTAGCC GCGCTGCTGG CGGGCGACGT GGACGCCTTC
CCGCGCGTCA CGCCGCGCAG CATGGCGCAG TTCAAGAACA ACCCGCGCTT TCAGGTAGTG
GTGAGCGGCT CGCGCGCCAA GACCATCCTC GCGATCAACA ACGCGCGCAA GCCCTTGAAC
GACGTGCGCG TGCGCCGCGC CATCGCCGCC GCGATCGACC GCAAGGCCAT CATCCAGGGC
GCGGCCGACG GCCTGGGCGT GCCCATCGGC AGTCACTACG TGCCCGGCGC CTTCGGCTAC
GTGGACACCA CGGGCATCAA TCCGCATGAC GTGGAGAAGG CCAAGCGCCT GCTGGCCGAG
GCCGGCGTGA AGACACCCCT CACCCTCACC ATGACGCTGC CGCCGGCGCC CTACGCACGC
CAGGGCGGCG AGCTGATTGC CTCACAGCTC GCCAAGGTGG GCATCGTTGC CAAGCTGCAG
AACGTAGAGT GGGCCCAATG GCTCAGCGGC ACCTACGGCA ACAAGAACTA CGACCTGACG
CTGATCTCGC ACGTGGAGCC TTTCGACCTG GGCAATTTCG CCAAGCCGGA CTACTACTGG
GGCTACCACT CGGAAAAATT CGACCAGCTG TACGAGCAGA TCAAGACCGC CACCCGCCCG
GCCGACCGCG CCCGCCTTCT GGGCGACGCG CAGCGCCTGC TGGCCGAGGA CGCAGTGCAC
GCCTTCCTGT ACCAGCCGCA ATGGGTCACC GTGGCCCACA AACAATTGCG CGGTCTGTGG
AAGGACATGC CGGTGTTCGT CAACGACCTG TCGGCATTGC ACTGGGCATA A
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| Protein sequence | MFTRRTALAS GALATAALAT PLHALAQGKK DAVTLALALE PPGLDPTAGA ASSIAEVTLY
NIYETLTKIN PDGSVSPLLA ESWEVSPDLK TYTFRLRKGV TFHNGEPLNA AAVKFSFDRA
GGDKSTNKDK RSFANLSTQA VDEYTVVVLN KDIDPDLLFV LGQATAIIVE PKSAATNATK
PVGTGPYKLA GWSRGASITL AAWPGWRQPS SIRIRRATFR FIPDAAAQVA ALLAGDVDAF
PRVTPRSMAQ FKNNPRFQVV VSGSRAKTIL AINNARKPLN DVRVRRAIAA AIDRKAIIQG
AADGLGVPIG SHYVPGAFGY VDTTGINPHD VEKAKRLLAE AGVKTPLTLT MTLPPAPYAR
QGGELIASQL AKVGIVAKLQ NVEWAQWLSG TYGNKNYDLT LISHVEPFDL GNFAKPDYYW
GYHSEKFDQL YEQIKTATRP ADRARLLGDA QRLLAEDAVH AFLYQPQWVT VAHKQLRGLW
KDMPVFVNDL SALHWA
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