Gene Ajs_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0858 
Symbol 
ID4673511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp905890 
End bp906639 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content73% 
IMG OID639837981 
Productglycerophosphodiester phosphodiesterase 
Protein accessionYP_985176 
Protein GI121593280 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CTTCCGCCTG GCCCTACCCC CGCTGGATCG CCCACCGCGG CGCCGGCAAG 
CTGGCGCCCG AGAACACGCT GGCCGCCTTC CGCCTGGGCG CGCAGCACGG CTACCGCATG
TTCGAGTGCG ACGCCAAGCT GAGCAGCGAC GGCGTGGCCT TCCTGCTGCA CGACGCCACG
CTGGAGCGCA CTACCAACGG CCACGGCACC GCAGGCGATC AGCCCTGGGG CACGCTGGCC
CAGCTGGACG CCGGTGCCTG GCATTCGCGC ACGTACGCGG GCGAGCCGCT GCCCACGCTG
GAGCACCTGG CGCGCTGGTG CATCGCCAAC GGCCACTTCC TCAACATCGA GATCAAGCCC
ACGCCCGGTA CCGAAGCCGA AACCGGCCGC GCCGTGGCCG CGCTGGCGGC ACGCCTGTGG
CACGGCCAGA GCGTGCCACC GCTGCTCACC TCGTTCAAAC CGCAGGCGCT GGCCGGCGCG
CGCGAGACCG CGCCGCATCT GCCCCGCGGC CTGCTGCTGG ACCAACTGCA TGACGGCTGG
CTGGACACCG CGCGCCAGTG GGGCTGCGTG GCCGTGGTCT GCAACCATGC GCTGTGGAGC
GCCGCCACCG TGGCCGAGGT GCACCTGGCC GGCATGCGCG CCCTGAGCTA CACCGTGAAC
GACGACTGGG CCGCCCAGCG GCTGCTGGCG CTGCACACCG ACGGCATCAT CACCGACCGC
GTGGACCTGT TCAGCCCCGC CGAGGCCTGA
 
Protein sequence
MTTPSAWPYP RWIAHRGAGK LAPENTLAAF RLGAQHGYRM FECDAKLSSD GVAFLLHDAT 
LERTTNGHGT AGDQPWGTLA QLDAGAWHSR TYAGEPLPTL EHLARWCIAN GHFLNIEIKP
TPGTEAETGR AVAALAARLW HGQSVPPLLT SFKPQALAGA RETAPHLPRG LLLDQLHDGW
LDTARQWGCV AVVCNHALWS AATVAEVHLA GMRALSYTVN DDWAAQRLLA LHTDGIITDR
VDLFSPAEA