Gene Ajs_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0857 
Symbol 
ID4673513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp903269 
End bp905791 
Gene Length2523 bp 
Protein Length840 aa 
Translation table11 
GC content73% 
IMG OID639837980 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_985175 
Protein GI121593279 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCC TTTCCCGCAC CGGCGCGCGC CCGCTGCGCC GCCGTCTCCC CCCGCAGAGC 
GCACGCCACC TTTGGCAGTG GTTGGTACTG GCCTGCTGCC TGTGGCTGGG CGGCACGCCC
GCCCTTGCCC AGACCCGGCC CGCTGCGGCC ACCGCCTCCG CCGCGGCCAG CGCGGTGGAC
ACGCTGGGTG AGGACAACGC CCCCCTGCCC TCGGTGGATG AACTGCGCAA GCAGCTCGAC
GCCATACCCG CAAAGCTCGG CGAGGAGGAC GACGGCCGCA AGCTGCTGAC CGAGCTGGCC
GCCATCGGCA CCGCGGCCGA GCGCGTGGTC GCCCAGCGCA CCAGCGACCT GGCGGACCTG
GACCGCCGCC TGGAAGGCCT GGGCCCCACG CCCGAAAAGG GCGCACCCGC GGATGCGCCC
GACGTGGCCG AGCAGCGCAC CGCGCTGAAC AAGCAGCGCG GCGTGATCGA TGCGGAACTC
AAGCTCGCCC GCCTGGTGGC CGTGGATGCC GAGCAGCGCA GCGCGGAGAT CGGGCGCCAG
CGGCGAGCGC TATTCCAGGC GGCCCTCACA ACGCGCGTCG ATTCGCCACT GGCCCCCGCC
TTCTGGCGCA GCCTGCGCTA CGCCGCGCCC GGCGACAGTG CGCGGCTGCA GGCGCTGGGC
GCCAACCTGC GCCGCGCCGT GCAGGCCACG CTGGACTCGC CGCGCCGCGG CACCTTCCTG
GGTTACCTGG CCCTGGCCGT CGCCCTGGCC GTGGGGGGCA CCTGGCTGGC GGAGCGTGTG
CTGGTGCGCG CGCTGCCCGC GCGGCTGCCA GCCACCCGGC TGCGGCGCAC GCTGCTGGCG
GCGGCGGCGG TGGTGGCGAA CGTGCTGATC GTCAGCGCTG CGCTGCAACT CGCGTGGAGC
GGGGTCAAGC TCGGCGGCGT GCTGGACGAG GACGTGCGCG CCGTGCAGCA GGCCAGCCTG
CGTGCCGCGG CCTACGCCAC CTTCGTCATC ACGCTGGGGC ACGCACTGCT GTCGCGCCGG
CGCAGTTCCT GGCGGCTGCT GCCCATCTCC GACGCGCTCG CCCGCCGGCT CAGCCCCTTC
CCGTGGTGGA TCGGGGCACT GTCGGCGCTG GGCGGGCTGG TCACACAGGT CAACGCCATC
GTGGGCGCCA GCCTGGCGGC CGAAGTGCTG GTGCACGCCG TGTCCGCGGT GTTGCTGTCG
GTGACGGTGG CCGTCGCGCT GGGCCGGCTG TGGGCAACGC CCCAGGCAGC GGACGCGGCC
GATAGCGCCA CCGACGCGGC GCCCGCGGAG AAGGCGGGCC GCCCCCTCTG GGTGGGGCTG
ATCCTGGCCA GCGCAGGCCT TGCCGCGGCC GCGGCCGCGC TGGCCGTGCT GCTGGGCTTC
GTGGCGCTGG GCGGCACGCT GGCGCGGCAG ATGGTGTGGT CGGGCGTGGT GTTTGCCACC
ACCTATCTGC TGATGCAGTT GGTGGACGAC CTGTGCGACG CGTTGCTCTC CTCCCACGGC
GGCCTGGGCG CGCGCATCCA CGCCGCGTTG GCCATCGACG CCCAGTTGCT GGACCAGGCC
GCGGTGCTGC TGGCCGGCGT GCTGCGTGTG GCGCTGTTCT TCTACATGGC GATCGCGCTG
ATGGCGCCGC TGGGCACCAA CCCGGACGAG CTGTTCCGCC GCGGCAGCAA GCTGGACCAC
AACCTGCAGA TCGGCGACTT CACGCTGGCG CCCCAGGCAC TGCTCACGGC GCTGGCGGTG
ATCTGTGCGG GCTTCCTGGC GATACGCATC GTCAAGCGCT GGCTCAGCGA CCGCTATTTC
CCCCACACAT CGCTGGAGCC GGGCATGCGC AGCTCCATTG TCACGCTGCT GGGCTACGTG
GGCGGCGTGG TGGTGATCGC CGTGGCGCTG GCGGGCCTGG GGATCAGCGT GGAGCGCATC
GCCTGGGTGG CGAGCGCGCT GTCGGTGGGC ATCGGCTTCG GCCTGCAGGC CATCGTGCAG
AACTTCATCT CGGGCCTGAT CCTGCTGGCC GAACGGCCGG TGAAGGTGGG CGACTGGGTG
GTGCTGGGCG ACACCGAGGG CGACGTGCGC CGCGTGAACG TGCGCGCCAC CGAGATCCAG
CTGGGCGACC GCTCCACGGT GATCGTGCCC AACTCGGAAT TCATCACCAA GACCGTGCGC
AACATGACGC TGGGCAGCGC CCAGGGCCGG GTGCTGCTGC GCCTGCCCGC ACCGCTGGAC
ACCGACGCGC GGCGCATGCG CGAGCTGATC CTGCAGGCCT TTCATGCGCA CGAGGACATC
CTGGAGAGCC CCGCGCCATC GGTGACGCTG GAAGGCATCC AGAGCGGCAC GCTCACCTTC
CTGGCGATCG GCTACGTGAG CAGCCCGCGC AACGCGGGAG GCGTGCGCAG CGACGTGCTG
TTCGCCATCC TGGAGGCGCT GCGCGACGCG GGCCTGTCGC TGTCGCCTCC AGCCACCACC
TCGGTGGCGC AGGCGCCGCG CGACGCCGCC CAGGAGGCGC CGCCGCTGTC GGAGCGCGTC
TGA
 
Protein sequence
MHRLSRTGAR PLRRRLPPQS ARHLWQWLVL ACCLWLGGTP ALAQTRPAAA TASAAASAVD 
TLGEDNAPLP SVDELRKQLD AIPAKLGEED DGRKLLTELA AIGTAAERVV AQRTSDLADL
DRRLEGLGPT PEKGAPADAP DVAEQRTALN KQRGVIDAEL KLARLVAVDA EQRSAEIGRQ
RRALFQAALT TRVDSPLAPA FWRSLRYAAP GDSARLQALG ANLRRAVQAT LDSPRRGTFL
GYLALAVALA VGGTWLAERV LVRALPARLP ATRLRRTLLA AAAVVANVLI VSAALQLAWS
GVKLGGVLDE DVRAVQQASL RAAAYATFVI TLGHALLSRR RSSWRLLPIS DALARRLSPF
PWWIGALSAL GGLVTQVNAI VGASLAAEVL VHAVSAVLLS VTVAVALGRL WATPQAADAA
DSATDAAPAE KAGRPLWVGL ILASAGLAAA AAALAVLLGF VALGGTLARQ MVWSGVVFAT
TYLLMQLVDD LCDALLSSHG GLGARIHAAL AIDAQLLDQA AVLLAGVLRV ALFFYMAIAL
MAPLGTNPDE LFRRGSKLDH NLQIGDFTLA PQALLTALAV ICAGFLAIRI VKRWLSDRYF
PHTSLEPGMR SSIVTLLGYV GGVVVIAVAL AGLGISVERI AWVASALSVG IGFGLQAIVQ
NFISGLILLA ERPVKVGDWV VLGDTEGDVR RVNVRATEIQ LGDRSTVIVP NSEFITKTVR
NMTLGSAQGR VLLRLPAPLD TDARRMRELI LQAFHAHEDI LESPAPSVTL EGIQSGTLTF
LAIGYVSSPR NAGGVRSDVL FAILEALRDA GLSLSPPATT SVAQAPRDAA QEAPPLSERV