Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0857 |
Symbol | |
ID | 4673513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 903269 |
End bp | 905791 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639837980 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_985175 |
Protein GI | 121593279 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGCC TTTCCCGCAC CGGCGCGCGC CCGCTGCGCC GCCGTCTCCC CCCGCAGAGC GCACGCCACC TTTGGCAGTG GTTGGTACTG GCCTGCTGCC TGTGGCTGGG CGGCACGCCC GCCCTTGCCC AGACCCGGCC CGCTGCGGCC ACCGCCTCCG CCGCGGCCAG CGCGGTGGAC ACGCTGGGTG AGGACAACGC CCCCCTGCCC TCGGTGGATG AACTGCGCAA GCAGCTCGAC GCCATACCCG CAAAGCTCGG CGAGGAGGAC GACGGCCGCA AGCTGCTGAC CGAGCTGGCC GCCATCGGCA CCGCGGCCGA GCGCGTGGTC GCCCAGCGCA CCAGCGACCT GGCGGACCTG GACCGCCGCC TGGAAGGCCT GGGCCCCACG CCCGAAAAGG GCGCACCCGC GGATGCGCCC GACGTGGCCG AGCAGCGCAC CGCGCTGAAC AAGCAGCGCG GCGTGATCGA TGCGGAACTC AAGCTCGCCC GCCTGGTGGC CGTGGATGCC GAGCAGCGCA GCGCGGAGAT CGGGCGCCAG CGGCGAGCGC TATTCCAGGC GGCCCTCACA ACGCGCGTCG ATTCGCCACT GGCCCCCGCC TTCTGGCGCA GCCTGCGCTA CGCCGCGCCC GGCGACAGTG CGCGGCTGCA GGCGCTGGGC GCCAACCTGC GCCGCGCCGT GCAGGCCACG CTGGACTCGC CGCGCCGCGG CACCTTCCTG GGTTACCTGG CCCTGGCCGT CGCCCTGGCC GTGGGGGGCA CCTGGCTGGC GGAGCGTGTG CTGGTGCGCG CGCTGCCCGC GCGGCTGCCA GCCACCCGGC TGCGGCGCAC GCTGCTGGCG GCGGCGGCGG TGGTGGCGAA CGTGCTGATC GTCAGCGCTG CGCTGCAACT CGCGTGGAGC GGGGTCAAGC TCGGCGGCGT GCTGGACGAG GACGTGCGCG CCGTGCAGCA GGCCAGCCTG CGTGCCGCGG CCTACGCCAC CTTCGTCATC ACGCTGGGGC ACGCACTGCT GTCGCGCCGG CGCAGTTCCT GGCGGCTGCT GCCCATCTCC GACGCGCTCG CCCGCCGGCT CAGCCCCTTC CCGTGGTGGA TCGGGGCACT GTCGGCGCTG GGCGGGCTGG TCACACAGGT CAACGCCATC GTGGGCGCCA GCCTGGCGGC CGAAGTGCTG GTGCACGCCG TGTCCGCGGT GTTGCTGTCG GTGACGGTGG CCGTCGCGCT GGGCCGGCTG TGGGCAACGC CCCAGGCAGC GGACGCGGCC GATAGCGCCA CCGACGCGGC GCCCGCGGAG AAGGCGGGCC GCCCCCTCTG GGTGGGGCTG ATCCTGGCCA GCGCAGGCCT TGCCGCGGCC GCGGCCGCGC TGGCCGTGCT GCTGGGCTTC GTGGCGCTGG GCGGCACGCT GGCGCGGCAG ATGGTGTGGT CGGGCGTGGT GTTTGCCACC ACCTATCTGC TGATGCAGTT GGTGGACGAC CTGTGCGACG CGTTGCTCTC CTCCCACGGC GGCCTGGGCG CGCGCATCCA CGCCGCGTTG GCCATCGACG CCCAGTTGCT GGACCAGGCC GCGGTGCTGC TGGCCGGCGT GCTGCGTGTG GCGCTGTTCT TCTACATGGC GATCGCGCTG ATGGCGCCGC TGGGCACCAA CCCGGACGAG CTGTTCCGCC GCGGCAGCAA GCTGGACCAC AACCTGCAGA TCGGCGACTT CACGCTGGCG CCCCAGGCAC TGCTCACGGC GCTGGCGGTG ATCTGTGCGG GCTTCCTGGC GATACGCATC GTCAAGCGCT GGCTCAGCGA CCGCTATTTC CCCCACACAT CGCTGGAGCC GGGCATGCGC AGCTCCATTG TCACGCTGCT GGGCTACGTG GGCGGCGTGG TGGTGATCGC CGTGGCGCTG GCGGGCCTGG GGATCAGCGT GGAGCGCATC GCCTGGGTGG CGAGCGCGCT GTCGGTGGGC ATCGGCTTCG GCCTGCAGGC CATCGTGCAG AACTTCATCT CGGGCCTGAT CCTGCTGGCC GAACGGCCGG TGAAGGTGGG CGACTGGGTG GTGCTGGGCG ACACCGAGGG CGACGTGCGC CGCGTGAACG TGCGCGCCAC CGAGATCCAG CTGGGCGACC GCTCCACGGT GATCGTGCCC AACTCGGAAT TCATCACCAA GACCGTGCGC AACATGACGC TGGGCAGCGC CCAGGGCCGG GTGCTGCTGC GCCTGCCCGC ACCGCTGGAC ACCGACGCGC GGCGCATGCG CGAGCTGATC CTGCAGGCCT TTCATGCGCA CGAGGACATC CTGGAGAGCC CCGCGCCATC GGTGACGCTG GAAGGCATCC AGAGCGGCAC GCTCACCTTC CTGGCGATCG GCTACGTGAG CAGCCCGCGC AACGCGGGAG GCGTGCGCAG CGACGTGCTG TTCGCCATCC TGGAGGCGCT GCGCGACGCG GGCCTGTCGC TGTCGCCTCC AGCCACCACC TCGGTGGCGC AGGCGCCGCG CGACGCCGCC CAGGAGGCGC CGCCGCTGTC GGAGCGCGTC TGA
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Protein sequence | MHRLSRTGAR PLRRRLPPQS ARHLWQWLVL ACCLWLGGTP ALAQTRPAAA TASAAASAVD TLGEDNAPLP SVDELRKQLD AIPAKLGEED DGRKLLTELA AIGTAAERVV AQRTSDLADL DRRLEGLGPT PEKGAPADAP DVAEQRTALN KQRGVIDAEL KLARLVAVDA EQRSAEIGRQ RRALFQAALT TRVDSPLAPA FWRSLRYAAP GDSARLQALG ANLRRAVQAT LDSPRRGTFL GYLALAVALA VGGTWLAERV LVRALPARLP ATRLRRTLLA AAAVVANVLI VSAALQLAWS GVKLGGVLDE DVRAVQQASL RAAAYATFVI TLGHALLSRR RSSWRLLPIS DALARRLSPF PWWIGALSAL GGLVTQVNAI VGASLAAEVL VHAVSAVLLS VTVAVALGRL WATPQAADAA DSATDAAPAE KAGRPLWVGL ILASAGLAAA AAALAVLLGF VALGGTLARQ MVWSGVVFAT TYLLMQLVDD LCDALLSSHG GLGARIHAAL AIDAQLLDQA AVLLAGVLRV ALFFYMAIAL MAPLGTNPDE LFRRGSKLDH NLQIGDFTLA PQALLTALAV ICAGFLAIRI VKRWLSDRYF PHTSLEPGMR SSIVTLLGYV GGVVVIAVAL AGLGISVERI AWVASALSVG IGFGLQAIVQ NFISGLILLA ERPVKVGDWV VLGDTEGDVR RVNVRATEIQ LGDRSTVIVP NSEFITKTVR NMTLGSAQGR VLLRLPAPLD TDARRMRELI LQAFHAHEDI LESPAPSVTL EGIQSGTLTF LAIGYVSSPR NAGGVRSDVL FAILEALRDA GLSLSPPATT SVAQAPRDAA QEAPPLSERV
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