Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0836 |
Symbol | |
ID | 4672737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 882668 |
End bp | 884263 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639837958 |
Product | integrase catalytic subunit |
Protein accession | YP_985154 |
Protein GI | 121593258 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.649092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACCCA ACCAACGGGC CACCGTCTAC ACGCTGCTCG AGCGTGGCAG CACCCAGCGC GAGATCGCGC GCATCACCGG AATCGACCGC AAGACCGTCA GGAGTTACCA ACGTCGCCGG CAGGCCGAGC AGTCAAATTC CCCCGGGGTG GCCACCGGCC CTGATGCCAT GGCCGCTCAC GTGGCCGCGC AAATTCCCCC ACCCTGGCCA CCGGCTCCCA CGTCAGTGGC CGCCTCCCTA TGCGAGCCGT ACCGCGACTT CATCGAGGCC CAACTGCGTC TCAAGCGCAA CGCCACGGCC ATCTACCAGG ACCTGGTCGA TGTCCACGGC TTTGCCGGCC AGTACAACTC GGTCAAACGC TTCGTGGCCC GGCTGCGTCA CAAGGAGCCC GAACAATTCG ACCGCCTGTC CTTCCTGCCC GCAGAGGAGA TGCAGGTGGA CTACGGTGAG GGTGCACCCA CCCGGGTGCC GGGCAGCAAC CGGTACCGCA AACCGCGCCT GTTCGTGGCC ACGCTGCGCT ACTCGCGGGC CAGCTTTCGG CACGTGGTCT GGAAGTCCAG CCAGCAGGTC TGGGCCGAGC TGCACGAGCG CGCGTTTCGC CACTTCGGTG GCTGCCCGCA GTACGTGGTG CTGGACAACC TCAAAGAGGG CGTCATCAAA CCCGACCTGT ATGAGCCCGA ACTCAACCCG GTCTATGCCG CCACCCTGGC GCACTACGGC GTGGTGGCCG ACCCGGCCCG GGTGCGTGAC CCCAACCGCA AGGGTACGGT AGAGCACGCC ATCGGCCACA CCCAGGCCAC GGCCTTGAAG GGCCGGCGCT TTGAGTCCAT CGAAGAGCAG AACACCTTCC TGGCGCAATG GGAGAAGAAT TGGGCAGCCA AGCGCATCCA CGGCACCGAG CGGCGCCAGG TGCAGGCCAT GTTCGCGGAA GAACGCCCCC ACCTCAAAGC TTTGCCACTG CTGGGCATGC AGTATTTCGA AGAGGTCCAG CGCACGGTGT GCGACGACAG CTGTGTGCGG GTGGAGCACA GCAGCTACGC CGCGCGCCCG GCGGTCATCG GATCGAAGGT GCGGGTGCGC ATCTTCGCCC AGCGCATCCA GATCTTTGAT CTGCAAACCG GCACCTTGCT GCGCAGTCAC CCCAAGGCTG AACGCCCCGG CACCGTGGTG CTGCCCCAGG ATGAGCGGGT GTTCAACCCC TCGCGTGAGA CCCGCCTGAT CCTGCGCCAG GCCGGCCAGA TTGGCGAACA CGCCGCCCGG CTGTGCCAGT TGCTCTTTGC CATCGAGGGC CGGGTGGGCC AGCGCAAGCT CTGGGGCATC GTCGGCCTGG TGCGCCGATA TCCGGCGCAT TGTGTCAACG CCGCTTGCGC CCAGGCTCTG GAGCAGGGCA TCTACAGCTT CAAGCGCGTC CAGGCATTGA CAGAGGCGCT CTTTGCCGAT GCGCTTGAAG CCATCGAGAC CCAGGCCGGT GGCGAGCATG TAACGCCCAC CACGGCGACC CTGACCCAGC AGCACGAGCT GATCCGCGAT GCCGATGAAT ACGGTGACCT GTTTGCCCAC GCTGCGGCCA CCGCCGCAGT TGGGAGCCAG CCATGA
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Protein sequence | MKPNQRATVY TLLERGSTQR EIARITGIDR KTVRSYQRRR QAEQSNSPGV ATGPDAMAAH VAAQIPPPWP PAPTSVAASL CEPYRDFIEA QLRLKRNATA IYQDLVDVHG FAGQYNSVKR FVARLRHKEP EQFDRLSFLP AEEMQVDYGE GAPTRVPGSN RYRKPRLFVA TLRYSRASFR HVVWKSSQQV WAELHERAFR HFGGCPQYVV LDNLKEGVIK PDLYEPELNP VYAATLAHYG VVADPARVRD PNRKGTVEHA IGHTQATALK GRRFESIEEQ NTFLAQWEKN WAAKRIHGTE RRQVQAMFAE ERPHLKALPL LGMQYFEEVQ RTVCDDSCVR VEHSSYAARP AVIGSKVRVR IFAQRIQIFD LQTGTLLRSH PKAERPGTVV LPQDERVFNP SRETRLILRQ AGQIGEHAAR LCQLLFAIEG RVGQRKLWGI VGLVRRYPAH CVNAACAQAL EQGIYSFKRV QALTEALFAD ALEAIETQAG GEHVTPTTAT LTQQHELIRD ADEYGDLFAH AAATAAVGSQ P
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