| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0831 |
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| Symbol | |
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| ID | 4672587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 872459 |
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| End bp | 873991 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639837953 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_985149 |
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| Protein GI | 121593253 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGA TTGGCAGGAT CCGGCATTTG CATGCCCGGA AGAACAAATC GGAGCGCGAG
ATATCGCGCA TGACAGGGCT CTCGCGCAAC ACGGTTGCGA AGTGGCTGCA CGGGGAAGTG
GACGGTCCAC CGAAGTACCG GCGCGGCGAG CAGCCCAACA AACTCACGGC GTTCCATGAC
GTGCTCAGGC AGGCCTTGAA GGCTGATGCA CGTCGGCCCA AACACGAGCG GCGCACAGCC
AAGGCGCTGT ACGCCGAGAT CAGGCGTGCG GGCTATGAGG GTGGTTACAC GCGGGTGACC
GACTTCATCC GGGCATGGCG CCAGGGCGAA GGCCAGGGGT CTGCGGGCAA CGCCTTCGTG
CCGTTGGCCT TCGAGCTGGG CGAGGCTTTC CAGTTCGACT GGAGCGAGGA AGGCATGGTG
ATCGGCGGCA TCTACTACCG GGTGCAGGTC TCACACATGA AGCTGTGCGC CAGTCGGGCT
TTCTGGCTGG TGGCCTACCC CAGCCAGGGC CACGAGATGC TGTTCGATGC CCACACCCGC
AGCTTCGCCG CGCTGGGTGG CGTGGCGCGC CGGGGCATCT ATGACAACAT GAAGACTGCG
GTAGACAAGG TCAAGAAGGG CAAGGGGCGC ATCGTCAACG AGCGCTTTGC CACCATGTGC
GCGCATTACC TGTACGACCC GGACTTCTGC AACGTGGCCA GCGGCTGGGA GAAAGGGGTG
GTGGAGAAGA ACGTGCAAGA CAGCCGCCGG CGCATCTGGA TCGACGCGGC CAAGATCAAG
TTCGGCAGCT TTACCGAACT CAACGCCTGG CTGGCCCAGC GCTGCCGCGC GTTGTGGGAC
GAGGTGCGCC ACCCCGAGCA CACCCAGTTC AGCGTGGCCG AGATGCTCGA ACACGAGCGC
GCGCACCTCA TGCCCATGCC CGTGCCGTTC GATGGCTACG TCGAGAAACC CGCTCGGGTC
ACCAGCACCT GTCTGGTGTC GGTGGCGCGC AACCGCTATT CGGTGCCGTG CGAACGGGTG
GGCCAGATGG TCAGTACGCG GTTGTATCCG GGCAGCGTCG CCATCGTGGC CGACGACACC
ATCGTGGCCC GCCACGACCG GCTGAGCAAC GCGGGCGAGA CCCGGTACGA CTGGCAGCAC
TACATCCCGC TGCTGCAGAG AAAGCCCGGT GCCCTGAGGA ACGGCGCGCC CTTTGCCGAC
ATGCCCGAGC CGCTGCAGCG GCTGCGCCGT GGGCTGCTGC GCAACCCGGG CGGCGACCGG
GTGATGGCGC AGGTGTTGGC CATTGTGCTC AGCGCCGGTC TGGACGCGGT GCTGGTGGCC
ATCGAGCTGG CGCTGGAGAG TGGGCCGCCT GGCAAGGTCA GTGTGGAGCA CGTGGTCAAC
GTGCTGAACC GGCTCAACGC GCAGCCGGTG CCGCCCACGG CGGCCACGCT GCTGAGAGCG
ACCACGCCGC CGCTGGCGAA CACGGCGCGC TACGACAGCC TGCGCTCGGA CACCGTGGGT
GCCATCACCG AAGGAGCCGA CCATGAAGAC TGA
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| Protein sequence | MDMIGRIRHL HARKNKSERE ISRMTGLSRN TVAKWLHGEV DGPPKYRRGE QPNKLTAFHD
VLRQALKADA RRPKHERRTA KALYAEIRRA GYEGGYTRVT DFIRAWRQGE GQGSAGNAFV
PLAFELGEAF QFDWSEEGMV IGGIYYRVQV SHMKLCASRA FWLVAYPSQG HEMLFDAHTR
SFAALGGVAR RGIYDNMKTA VDKVKKGKGR IVNERFATMC AHYLYDPDFC NVASGWEKGV
VEKNVQDSRR RIWIDAAKIK FGSFTELNAW LAQRCRALWD EVRHPEHTQF SVAEMLEHER
AHLMPMPVPF DGYVEKPARV TSTCLVSVAR NRYSVPCERV GQMVSTRLYP GSVAIVADDT
IVARHDRLSN AGETRYDWQH YIPLLQRKPG ALRNGAPFAD MPEPLQRLRR GLLRNPGGDR
VMAQVLAIVL SAGLDAVLVA IELALESGPP GKVSVEHVVN VLNRLNAQPV PPTAATLLRA
TTPPLANTAR YDSLRSDTVG AITEGADHED
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