Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0809 |
Symbol | |
ID | 4671067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 854813 |
End bp | 856525 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639837933 |
Product | hypothetical protein |
Protein accession | YP_985129 |
Protein GI | 121593233 |
COG category | [S] Function unknown |
COG ID | [COG1479] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTACA AACTCGAATA CCGAACCATC TGCTTTGGTG TTGATTCAGC AAGCCGCCTG CCCACCCAGG GCATAGAGGG AACCTTCTTC ATCCCCTCCT ACCAACGCGG CTATCGCTGG ACTGCGGACG AAGTCACCAA GCTGCTGGAC GACATCTGGG AGAGCGCAGG CCAGCGCTAC AGCCTGCAGC CTATCGTCGT GAAAAGCCTG GGCACCGGCG CATGGGAGCT GATCGACGGC CAGCAGCGCC TGACAACCCT GTGGCTGCTG CTGCGCTTCA TGAACAAAGG TGAGCCCCGC TACCACCTGG AATACCAGAC CAGGGCTGGC AGCCAGGCGT ACCTGAGAGA ACTTGATGCC GCGCAAGCTG AGGAAAACAT CGACTACTTC CACATGCACC AGGCCTATGC AACGATTGCT GGCTGGTTCG CAAACAAGAT GGGGCTGCAG TACCAACAAT TTCTGGTCGA TGAGATGTTC CGTTTTCTCT CGACCTCGGT GCGCGTCATC TGGTACGAAG TCCCCGCAAG CGAAGAGCCT ATCCCTTTGT TCACCCGCTT GAACCAGGGC CGCATTCCGT TGACCGATGC GGAGCTGCTC AAGGCGGTCC TGCTGTCGAA AGTGCAGGAA AAGCACCCTG GCCGCGAGAC CGAGATCGCC GCGCAGTGGG ACGGGATTGA GCGTGATTTG CAACGGCCGG ATGTCTGGGC CTTCGTCACA GGCCAGGCAG CTGCACAGGG CCGCGTCACC CTGCAGCACG GCACGCGCAT CGACCTGTTG TTCGATACCC TGGCAAAGAA GCCCGCCACG GGCGCGCCGG CGTATCACAC CTTTGACCAA TTGCGCCCTC AGGCCGAGGG CGATTCACTG GCCTTCTGGG CGAAAGTGGA AGCACTGCAC GCGCAAATCC TGGGTTGGTT CGAAGAGCCG CTCTGGCACA ACAAAATCGG TTTCCTGGTG ACCTGTGGAT TGTCCCTGCA GGCCATCTTC GACCTGGCCC AGGGGCAAGG CAAGAAGGCC TTCGACAATG CCCTTACCTC ACGCATCAAG GCCACACTGA ATACCCGCGC CGACGATCTC GACGGCACCC TGCACTACGA GAACAGCAGC CATAAAGTCA CATTGCAGCG TCTGCTGCTA TTGTTCAACA TCGAGGTCCG CCGTGACCGC TTTCCATTCA AGGAGCACGT CGGCGCCACA TGGTCCCTGG AGCATATCCA TGCGCAGAAC GCCCAGGACT TGATCCGCGC AGAGCAATGG GAGACGTGGC TTGCAGAGCA TCGCCAGGCC TTGAGCGACA TCCGGGCAAC AGGCAACATG GCCGCTATTG ACCCGTTGCT GGCCGACATC AACGCAGCTA CTCCGCACCT GCATACCAAG CAGTTTGGTC TGGAAGAATT CAAGGCGCTG GCAGGGAGGG TTCTCGTGGA ACTCAATGAC GGCGTGGAAG AAGAGGCGGA CCACAGCATT GCCAACCTGG CATTGCTATC CCTCGGCGCC AACGCCGCGC TGAGCAATGC AGTTTTTGAA GTCAAACGCA GCAAAGTGCT GGCGATGGAC AGGCGCGGCG ACTACATCCC GGCCGCCACG CGCAACGTGT TCCTGAAGTA CTACGCGCCT GCAGACCGGC TGCAACCTCA TTTCTGGGGA GACGCCGACA AAGACGCCTA TCTCCGAGAA ATCAAGAAAA AACTGGCCGC ATACCTGCAA TGA
|
Protein sequence | MSYKLEYRTI CFGVDSASRL PTQGIEGTFF IPSYQRGYRW TADEVTKLLD DIWESAGQRY SLQPIVVKSL GTGAWELIDG QQRLTTLWLL LRFMNKGEPR YHLEYQTRAG SQAYLRELDA AQAEENIDYF HMHQAYATIA GWFANKMGLQ YQQFLVDEMF RFLSTSVRVI WYEVPASEEP IPLFTRLNQG RIPLTDAELL KAVLLSKVQE KHPGRETEIA AQWDGIERDL QRPDVWAFVT GQAAAQGRVT LQHGTRIDLL FDTLAKKPAT GAPAYHTFDQ LRPQAEGDSL AFWAKVEALH AQILGWFEEP LWHNKIGFLV TCGLSLQAIF DLAQGQGKKA FDNALTSRIK ATLNTRADDL DGTLHYENSS HKVTLQRLLL LFNIEVRRDR FPFKEHVGAT WSLEHIHAQN AQDLIRAEQW ETWLAEHRQA LSDIRATGNM AAIDPLLADI NAATPHLHTK QFGLEEFKAL AGRVLVELND GVEEEADHSI ANLALLSLGA NAALSNAVFE VKRSKVLAMD RRGDYIPAAT RNVFLKYYAP ADRLQPHFWG DADKDAYLRE IKKKLAAYLQ
|
| |