| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0804 |
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| Symbol | |
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| ID | 4670601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 846397 |
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| End bp | 847614 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639837928 |
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| Product | type II secretion system protein |
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| Protein accession | YP_985124 |
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| Protein GI | 121593228 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.318663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCG TTGCAGCGAG GGGCATCAAG GACTTTGTCT TCGAGTGGGA GGGCAAGGAT
CGTAGCGGCA AGATCGTGCG CGGCGAAGTA CGCGCCGCGG GAGAGAACCA GGTCAAAGCA
ACGCTGCGGA GGCAGGGCGT TCTGCCAACC AAGATCAAGA AGCGCCGGAT GAGCGCGGGC
AAAAAGATCA AGCCCAAAGA CATCGCGCTG TTCACGCGCC AGATGGCCAC GATGATGAAG
GCCGGCGTTC CACTGCTTCA GGCATTTGAT ATCGTGGGCC GGGGTAATAC CAATCCCAGT
GTGACCAAGC TGCTCAACGA TATCCGCGGC GATGTGGAGA CAGGAACGTC CCTGAATGCC
GCATTCCGTA AATATCCGAT GTACTTCGAC AGCCTTTACT GCAACCTCGT AGAGGCCGGC
GAAGCTGCCG GTATCCTGGA AGCGTTGCTC GACCGGCTGG CCCTGTACAT GGAGAAGACC
GAGGCCATCA AATCCAAGAT CCGGTCGGCG CTGATGTACC CGATCTCGGT GATCATCGTT
GCGTTTGTCG TGGTGACGAT CATCATGATT TTCGTGATTC CCGCGTTCAA AGAGGTTTTC
ACCTCGTTCG GAGCCGACCT GCCCGCTCCT ACCCTGTTCG TGATGGCCAT CAGCGAATTC
TTCGTGGCTT ACTGGTGGCT GATATTCGGC GTCATCGGCG GGGGGTTCTA CTTTTTCATG
CAGGCCTGGA AGCGCAGCGA GAAAATGCAG CGTTTCATGG ACCGTTTCCT GTTGAAAATG
CCCGTCTTCG GTGCATTGAT CGACAAGTCC TGCGTTGCCC GTTGGACCCG CACCCTGTCG
ACCATGTTCG CTGCCGGTGT GCCATTGGTG GAGGCACTGG ACTCGGTGGG CGGTGCATCG
GGCAACTCGG TCTACGCCAT CGCGACGGAG AAGATTCAGC AGGAAGTCTC CACAGGTACC
AGCCTGACGG CCGCCATGGG GAATGCCAAC GTCTTTCCCT CCATGGTGCT GCAGATGTGT
GCGATCGGCG AGGAATCCGG CTCCATCGAC CACATGCTGG GCAAGGCCGC CGACTTCTAT
GAAGCCGAAG TGGATGAAAT GGTGGCCGGC CTGTCCAGCC TGATGGAGCC CATCATCATC
GTGTTCCTGG GCACGCTGAT CGGTGGCATC GTGGTGTCGA TGTACCTTCC GATCTTCAAG
CTCGGGCAAG TGGTTTGA
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| Protein sequence | MATVAARGIK DFVFEWEGKD RSGKIVRGEV RAAGENQVKA TLRRQGVLPT KIKKRRMSAG
KKIKPKDIAL FTRQMATMMK AGVPLLQAFD IVGRGNTNPS VTKLLNDIRG DVETGTSLNA
AFRKYPMYFD SLYCNLVEAG EAAGILEALL DRLALYMEKT EAIKSKIRSA LMYPISVIIV
AFVVVTIIMI FVIPAFKEVF TSFGADLPAP TLFVMAISEF FVAYWWLIFG VIGGGFYFFM
QAWKRSEKMQ RFMDRFLLKM PVFGALIDKS CVARWTRTLS TMFAAGVPLV EALDSVGGAS
GNSVYAIATE KIQQEVSTGT SLTAAMGNAN VFPSMVLQMC AIGEESGSID HMLGKAADFY
EAEVDEMVAG LSSLMEPIII VFLGTLIGGI VVSMYLPIFK LGQVV
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