Gene Ajs_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0789 
Symbol 
ID4672457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp832526 
End bp833125 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content61% 
IMG OID639837912 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_985109 
Protein GI121593213 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.115121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAA CTCCGATCGA CTCCAGCAAG CGGACGTGGC TGATTGCGTC CGGCTGCGCT 
GGTGCGGTGG GCGGCGTGGC GACTGCCGTT CCTTTTGTGA GCACTTTCCA ACCGTCTGAA
AAGGCCAAGG CAGCAGGTGC TGCCGTCGAG GTGGATATCT CGGGTCTCAA GCCCGGCGAA
AAAATCACCG TGGAATGGCG TGGAAAGCCT GTTTGGATTG TCAAGCGCAC GCCCGAGCAG
CTTGCCGAGC TGCCCAAGCT GGATGCGCAG CTTGCCGATC CCAAATCGGC GCGCAACCCT
GCGGAGCTCA CGCCGGAATA TGCGCGCAAC GAATGGCGCT CCATCAAACC CGAGGTGTTC
GTGGCCGTGG GTATCTGCTC CCACCTTGGC TGCTCTCCCA CGGAGAAGTT CGCGCCGGGC
CCGCAGCCTT CCCTGCCTGA CGACTGGAAG GGCGGTTTCC TGTGCCCTTG CCATGGCTCC
ACATTCGACA TGGCGGGCCG TGTGTTCAAG AACAAGCCTG CGCCTGACAA TCTCGAAGTG
CCGCCGCACA TGTACCTGTC GGAGACCAAG CTCCTGATCG GTGAAGACAA GAAGGCCTGA
 
Protein sequence
MSETPIDSSK RTWLIASGCA GAVGGVATAV PFVSTFQPSE KAKAAGAAVE VDISGLKPGE 
KITVEWRGKP VWIVKRTPEQ LAELPKLDAQ LADPKSARNP AELTPEYARN EWRSIKPEVF
VAVGICSHLG CSPTEKFAPG PQPSLPDDWK GGFLCPCHGS TFDMAGRVFK NKPAPDNLEV
PPHMYLSETK LLIGEDKKA