Gene Ajs_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0784 
Symbol 
ID4673320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp827231 
End bp828370 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content68% 
IMG OID639837907 
Productpeptidase S1 and S6, chymotrypsin/Hap 
Protein accessionYP_985104 
Protein GI121593208 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0429954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCC TCTGGCTCCT GCTCTCCCAA TCCGTCACCG TGCTGCTGGC TGCGTACTTC 
GTGGTGGCCA CTCTGCAGCC CGACTGGCTG CAGCGCGGCG CCACACGCAG CGGCGCTGGC
ATATCGCTCA TCGAGGCGCC CTCCTCCACG TCCGCCCAGC CCGCGGCGGG CAGCTTCAGT
GGGGCGGCGC GCAAGGCGGC GCCAGCGGTG GTCAGCATCA ACACCAGCAA GGCCGTGCGC
CACCCGCGCA GCAACGACCC GTGGTTCCAG TTCTTCTTTG GCGACCAAGG CACCCAGGCG
CAAACCGGCC TGGGCAGCGG CGTGATCATC AGCCCCGACG GCTACATCCT CACCAACAAC
CACGTGGTGG AGGGCGCCGA CGAGATCGAG GTGACGCTCA CCGACAGCCG GCGCGCGCGC
GCCACCATCA TCGGGACCGA CCCTGAAACC GACCTGGCCG TGCTGAAGGT GGATCTGGAC
AAGCTGCCCG TCATCGTGCT GGGCGATTCC GACCAGCTCG CCGTGGGCGA TCAGGTGCTG
GCCATCGGCA ATCCCTTTGG CGTGGGCCAG ACGGTCACCA GCGGCATCGT GTCGGCCCTG
GGTCGCAGCC AACTGGGCAT CAACACTTTC GAGAACTTCA TTCAGACCGA CGCGGCCATC
AATCCCGGCA ACTCCGGCGG CGCGCTGGTG GACGTGAATG GCAACCTGAT GGGCATCAAC
ACCGCCATCT ACTCCCGCTC AGGCGGCAGC ATGGGCATCG GCTTCGCCAT TCCCGTGTCG
ACGGCCAAGC TGGTGCTGGA CGGTATCGTG CGCGACGGGC AGGTCACGCG CGGCTGGATC
GGCGTGGAGC CCAACGAACT GTCCCCGGAA CTGGCGCAGA CCTTTGGCGT CAAGGCCACG
GAGGGCGTGA TCATCACCGG CGTGCTGCAG GGCGGTCCCG CGGCAGTGGC GGGGGTGCGG
CCGGGCGACG TGATCCTGAG CGTGGAGGAC AAAGCCACCA ACAACGTGTC GCAACTGCTC
ACGGCGGTGG CGTCCCTCAA GCCCGGCTCC GCGGCCAGCT TTGCGCTGCA GCGCGGCGAC
GCGCGGCTGG AAGTATCGGT GGTGCCGGGC ACGCGGCCCC GCGTGCAGCA GCGCCGCTGA
 
Protein sequence
MKRLWLLLSQ SVTVLLAAYF VVATLQPDWL QRGATRSGAG ISLIEAPSST SAQPAAGSFS 
GAARKAAPAV VSINTSKAVR HPRSNDPWFQ FFFGDQGTQA QTGLGSGVII SPDGYILTNN
HVVEGADEIE VTLTDSRRAR ATIIGTDPET DLAVLKVDLD KLPVIVLGDS DQLAVGDQVL
AIGNPFGVGQ TVTSGIVSAL GRSQLGINTF ENFIQTDAAI NPGNSGGALV DVNGNLMGIN
TAIYSRSGGS MGIGFAIPVS TAKLVLDGIV RDGQVTRGWI GVEPNELSPE LAQTFGVKAT
EGVIITGVLQ GGPAAVAGVR PGDVILSVED KATNNVSQLL TAVASLKPGS AASFALQRGD
ARLEVSVVPG TRPRVQQRR