Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0784 |
Symbol | |
ID | 4673320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 827231 |
End bp | 828370 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837907 |
Product | peptidase S1 and S6, chymotrypsin/Hap |
Protein accession | YP_985104 |
Protein GI | 121593208 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family [TIGR02038] periplasmic serine pepetdase DegS |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0429954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGCC TCTGGCTCCT GCTCTCCCAA TCCGTCACCG TGCTGCTGGC TGCGTACTTC GTGGTGGCCA CTCTGCAGCC CGACTGGCTG CAGCGCGGCG CCACACGCAG CGGCGCTGGC ATATCGCTCA TCGAGGCGCC CTCCTCCACG TCCGCCCAGC CCGCGGCGGG CAGCTTCAGT GGGGCGGCGC GCAAGGCGGC GCCAGCGGTG GTCAGCATCA ACACCAGCAA GGCCGTGCGC CACCCGCGCA GCAACGACCC GTGGTTCCAG TTCTTCTTTG GCGACCAAGG CACCCAGGCG CAAACCGGCC TGGGCAGCGG CGTGATCATC AGCCCCGACG GCTACATCCT CACCAACAAC CACGTGGTGG AGGGCGCCGA CGAGATCGAG GTGACGCTCA CCGACAGCCG GCGCGCGCGC GCCACCATCA TCGGGACCGA CCCTGAAACC GACCTGGCCG TGCTGAAGGT GGATCTGGAC AAGCTGCCCG TCATCGTGCT GGGCGATTCC GACCAGCTCG CCGTGGGCGA TCAGGTGCTG GCCATCGGCA ATCCCTTTGG CGTGGGCCAG ACGGTCACCA GCGGCATCGT GTCGGCCCTG GGTCGCAGCC AACTGGGCAT CAACACTTTC GAGAACTTCA TTCAGACCGA CGCGGCCATC AATCCCGGCA ACTCCGGCGG CGCGCTGGTG GACGTGAATG GCAACCTGAT GGGCATCAAC ACCGCCATCT ACTCCCGCTC AGGCGGCAGC ATGGGCATCG GCTTCGCCAT TCCCGTGTCG ACGGCCAAGC TGGTGCTGGA CGGTATCGTG CGCGACGGGC AGGTCACGCG CGGCTGGATC GGCGTGGAGC CCAACGAACT GTCCCCGGAA CTGGCGCAGA CCTTTGGCGT CAAGGCCACG GAGGGCGTGA TCATCACCGG CGTGCTGCAG GGCGGTCCCG CGGCAGTGGC GGGGGTGCGG CCGGGCGACG TGATCCTGAG CGTGGAGGAC AAAGCCACCA ACAACGTGTC GCAACTGCTC ACGGCGGTGG CGTCCCTCAA GCCCGGCTCC GCGGCCAGCT TTGCGCTGCA GCGCGGCGAC GCGCGGCTGG AAGTATCGGT GGTGCCGGGC ACGCGGCCCC GCGTGCAGCA GCGCCGCTGA
|
Protein sequence | MKRLWLLLSQ SVTVLLAAYF VVATLQPDWL QRGATRSGAG ISLIEAPSST SAQPAAGSFS GAARKAAPAV VSINTSKAVR HPRSNDPWFQ FFFGDQGTQA QTGLGSGVII SPDGYILTNN HVVEGADEIE VTLTDSRRAR ATIIGTDPET DLAVLKVDLD KLPVIVLGDS DQLAVGDQVL AIGNPFGVGQ TVTSGIVSAL GRSQLGINTF ENFIQTDAAI NPGNSGGALV DVNGNLMGIN TAIYSRSGGS MGIGFAIPVS TAKLVLDGIV RDGQVTRGWI GVEPNELSPE LAQTFGVKAT EGVIITGVLQ GGPAAVAGVR PGDVILSVED KATNNVSQLL TAVASLKPGS AASFALQRGD ARLEVSVVPG TRPRVQQRR
|
| |