Gene Ajs_0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0783 
Symbol 
ID4673148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp826307 
End bp827095 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID639837906 
ProductSec-independent protein translocase TatC 
Protein accessionYP_985103 
Protein GI121593207 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.037642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAA TACCGAACCA AGAAGACGAG CTCGCCGGTA CCGAGCAGCC TTTCGTGCAG 
CACCTGATGG AGCTGCGCGA CCGCCTCGTG AAGGCCATGA TCGCGGTGGG GGTCGTCGCG
GCCGCCCTGT TCTTCTACCC CGGTCCCGGC CAGCTGTACG ACTTCCTGGC CGCGCCCTTG
GTGGCCCACT TGCCGCAGGG GGCTACCATG ATCGCCACCT CGGTGATCTC GCCCTTCATG
GTGCCGCTCA AGATCCTGCT GATGTCGGCA TTCCTCGTGG CGCTGCCCTT CGTGCTGTGG
CAGGTGTGGG CCTTCGTGGC GCCGGGGCTG TATTCGCACG AGAAGCGCCT GGTGCTGCCG
CTGGTGGTTT CCAGCACGGT GCTGTTCTTC ATCGGCGTGG CGTTCTGCTA CTTCTTCGTG
TTTGGGCAGG TGTTCAGCTT CATCCAGGGT TTTGCACCCA AGAGCATCAC GGCCGCGCCG
GACATCGAGG CCTACCTGGG CTTCGTGATG ACCATGTTCC TCGCCTTCGG CCTGGCCTTT
GAGGTGCCGA TCGCCGTGGT GGTGCTGGCG CGCCTGAACG TCGTGAGCGT GGAAAAGCTC
AAGAGCTTCC GCGGCTACTT CATCGTGGTC GCGTTCGTGA TCGCCGCCAT CGTCACGCCG
CCGGACGTGG TGTCGCAACT GGCGCTGGCG ATTCCCATGT GCCTGCTCTA CGAGTTGGGC
ATCTGGGCGG CGCAGCTGTT CATCCGCCAT ACCAAGGCAC CCGAAGATCC GCAGGAATCC
GCGCCGTGA
 
Protein sequence
MSEIPNQEDE LAGTEQPFVQ HLMELRDRLV KAMIAVGVVA AALFFYPGPG QLYDFLAAPL 
VAHLPQGATM IATSVISPFM VPLKILLMSA FLVALPFVLW QVWAFVAPGL YSHEKRLVLP
LVVSSTVLFF IGVAFCYFFV FGQVFSFIQG FAPKSITAAP DIEAYLGFVM TMFLAFGLAF
EVPIAVVVLA RLNVVSVEKL KSFRGYFIVV AFVIAAIVTP PDVVSQLALA IPMCLLYELG
IWAAQLFIRH TKAPEDPQES AP