Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0783 |
Symbol | |
ID | 4673148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 826307 |
End bp | 827095 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639837906 |
Product | Sec-independent protein translocase TatC |
Protein accession | YP_985103 |
Protein GI | 121593207 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.037642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAA TACCGAACCA AGAAGACGAG CTCGCCGGTA CCGAGCAGCC TTTCGTGCAG CACCTGATGG AGCTGCGCGA CCGCCTCGTG AAGGCCATGA TCGCGGTGGG GGTCGTCGCG GCCGCCCTGT TCTTCTACCC CGGTCCCGGC CAGCTGTACG ACTTCCTGGC CGCGCCCTTG GTGGCCCACT TGCCGCAGGG GGCTACCATG ATCGCCACCT CGGTGATCTC GCCCTTCATG GTGCCGCTCA AGATCCTGCT GATGTCGGCA TTCCTCGTGG CGCTGCCCTT CGTGCTGTGG CAGGTGTGGG CCTTCGTGGC GCCGGGGCTG TATTCGCACG AGAAGCGCCT GGTGCTGCCG CTGGTGGTTT CCAGCACGGT GCTGTTCTTC ATCGGCGTGG CGTTCTGCTA CTTCTTCGTG TTTGGGCAGG TGTTCAGCTT CATCCAGGGT TTTGCACCCA AGAGCATCAC GGCCGCGCCG GACATCGAGG CCTACCTGGG CTTCGTGATG ACCATGTTCC TCGCCTTCGG CCTGGCCTTT GAGGTGCCGA TCGCCGTGGT GGTGCTGGCG CGCCTGAACG TCGTGAGCGT GGAAAAGCTC AAGAGCTTCC GCGGCTACTT CATCGTGGTC GCGTTCGTGA TCGCCGCCAT CGTCACGCCG CCGGACGTGG TGTCGCAACT GGCGCTGGCG ATTCCCATGT GCCTGCTCTA CGAGTTGGGC ATCTGGGCGG CGCAGCTGTT CATCCGCCAT ACCAAGGCAC CCGAAGATCC GCAGGAATCC GCGCCGTGA
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Protein sequence | MSEIPNQEDE LAGTEQPFVQ HLMELRDRLV KAMIAVGVVA AALFFYPGPG QLYDFLAAPL VAHLPQGATM IATSVISPFM VPLKILLMSA FLVALPFVLW QVWAFVAPGL YSHEKRLVLP LVVSSTVLFF IGVAFCYFFV FGQVFSFIQG FAPKSITAAP DIEAYLGFVM TMFLAFGLAF EVPIAVVVLA RLNVVSVEKL KSFRGYFIVV AFVIAAIVTP PDVVSQLALA IPMCLLYELG IWAAQLFIRH TKAPEDPQES AP
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