| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0772 |
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| Symbol | |
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| ID | 4674719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 813965 |
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| End bp | 817855 |
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| Gene Length | 3891 bp |
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| Protein Length | 1296 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639837895 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_985092 |
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| Protein GI | 121593196 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.939745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.176155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCGC CCAGATCCAG ATCCTCTGCC CAGAGCGTTG AGCGGCCCAT CCTTGCGCCC
AACTGGCTCG TCGCGCTGCT CACCGCCATG GCGTGCGGCG CGCTGTGGCT GCTATACCCG
CGCCAGGACC TGGAGCAGCG CCTGGCGACG AGCGGCGAGA CCGAGCTGTC CACCGCCTAC
CTGAACAACC TGCTGCGCAG CGACCCCGAC AACCCGCGCC TGCGCCTGCT GCTCGCGCAG
CGCCAGATCG CCCATGGCGA CACCGCCAGC GCGCGCACGA CGCTGCAGCC CGCCCTGGAC
TCGGCCGACC CCGCATTGCG CAAGGAAGCG CTGTGGGCGC AATGGGACCT GCTCCACTCC
GAGTACCGGC ATGTCCCGGA CCGCGAGCCT GACAGGCGGC TCGCGCTGCT CGATGGGCTG
CGGCGGCACA TACGCCAGCT GGCGCAGGAA GGCTGGCCCC AGGAGCGGCA GGATAGGCTG
GCAGCCTTGG CCAGTCAGTT CGGCGAGCAG GAGATCGCCC TGGCACTCAG TCGCCGGGAA
GCCCCGCAGG ACCCGCGCGA GGCCGCCCTG TACTACGAGC GCGAAGCCAG GGAAGCGCTG
GCGCGCGGCG ACTACGAGGG CTGCGCGCAG CTCTACCTGT CCGCGCGCGA CAGCACCCCC
GACCCAGCCC AGGCCAAGGC GTACTACGGC GCGGCCATTG CCGCACTGCG GTCGGGCAAC
CAGACCGCGG CCGCCCTGGA GCTGGCCGAG CGCGAGCTGG GCCCCCTGGC CGACGACCCG
CAGACCCTGT TCATGCTCAC GCAGCTGGCA CGCGCCGCAG GCCGCCCCGA CGTGGCCGAG
CACTACGTGC GCCGCCTGCT GCGCATGGCG CTCGAACGGC AGGCCACCCA ATGGGCCAGC
GCCGAGCAGG ACTTCGCGCT GCGGCCCGTC GCCTGGCGCC CGCAGCCGCC TGCCGCGCTG
GCGGGGCCGG TGTTCGACGA TGGCGCCGAC CTGCTCGTGC ATCCGGCCCT GCGCCTCGCG
CAGCAGGTGG CGGACAAGGC CTCCGCCCGG CCTTCGCCCG CCCTGCCCTT CGACGACAAG
ACCTACGCCC TGGGCTACGA GGTGTTCCTG GAAAACCGCA AGCTCGAGGA CGCCTGGACC
ATCGCCAACG CCGCGGTGCG CCAGAACCCC GCCGACATGC GATGGCGCGA GCGCCTGGCA
CAGGTGTCTG AGTGGACGCA GCGCCCCGGC ATCGCGCTGG AGAACTGGCT CGTCCTGGCG
CGCCAGACGA ACCAGGACGC CGCCTGGCAG GCCGTGTTGC GGCTGGCGCC GGGCCAGTTC
GACGATGCAG CGCTGGTGCA GGCGCTGCGC CACCAGCTGC GCAGCCGCTC CGGCGACCCA
CGCCTGATGC GCGCCCTGGT CGATGCGCAG GAACGCCTGG GTGAACCCCA GCCCGCCATC
GACTACCTGC GCCAGCACGC GCAGGACCCC GAGGCGCTGG AGCTGCTGGC GCAGCTGGCC
GAACGCGCAG GCCAGCCCGA TCTGGCCCTG CAGACCTGGC GGCAACTGCT GGCCGACCCT
GCACAGATCA CCCCCGAGCG CGCCATGCAT GCCGCCGTGC TGGCCCTGCA GCACCGCCAG
CCCGAACTGG GCCTGCAATG GCTGCAGGCC GTGCAGGACC ACCCTCCTGC GTCCGCTGAA
GCGGCCGCCG AGCTGTGGCG CTTCACGGGC GACCTGGCCA GGAGCCGGGC GCGCGACCAG
CTCGCCATTG CCGCCTACCG CAAACTGGTG GACGCGCAAC ATGCCGACGT CGCGGACTAC
GACGCACTCA TCGGCCTGCT GCAGCAGGAC CAGCCCCTGG AGGCCGCCAA GGTGGCACTG
CTGGCCTGGC AGCAGCACGA TGAGCCGCGC CACCTGATCG AGGCCCTGAC CCTGTACTCC
AGCCGCAACC AGTGGAACGA ATTCGCGCAC GCCCTGGATC AGCTCGACCC CACCCCCGAC
GCCGCGCGCC ATTCCCTGGC CCGAATGCGC CGCTCGGGGC AATTCCTGCG CCTGGTGGGC
GGCTACCACC ACAACGCCGG GCGGTTCGCA GAGGCGCGGC AGTACTACGA AGAGGGGCTG
GCCATCGATC CGGCGTCCTC CGACATGCGC CAGGCACTGC TGTGGCTGCT CATCGACAGC
AACGACGCGG CCTCGATCCG CCGGCTGCTG GCCGCGCACG AACAGGCCTG GAGCGCGGAC
GAGGACCTGC ATGAGGCGCT GGCGGCCGCC TACCAGGCCT TGTCGCTGCC CCAGGTGGCG
CTGCACCGCT ACCTCAGCCC CCATGTGGCC GAACGCGAAG GCGACTTCCT CTGGCTCATG
AACTACGCCG ATGCCCTGGA GCAGAACCAG GAGGCGGATC GCGCCTGGCG CCTGCGCCGC
CACCTGCTGT CGCAACAATG GCAGGAGGGG CGGAACGGCC GGCGCCTGAC TCCCGCGCAG
GCGCGCCAGC GCTGGCTCAC CGAGGAAGGG CTGGAGGCCA CGCAGCGCGT CGCCCGCGCG
CGCCTGATCC TGCTGCAAAG GCCCGGCGAC CCTGCACAGG AGGTGCTGCG CGAGCTACTG
CGCCTGGATC GCGATGCCCA GGGCGGCTAC TCCAACGCCG CGGCCGAAAC CGCCATAGGT
TGGCTGCAGG ACGCCGGCGA ATACACGGCC GAACGCGGCT TCCTGTGGCA CCAGTACGCG
CGCAGCCGCA GCCTGCGCAC CAATCGCCCG CTGTGGGCCG AGATCACCGT GGCCCTGGCC
GAGGACGACA AGGCCGCCGC GGGCCAGCTG CTGCAGGAAT TCGACGAGCG CCTGCCGCGC
TACGACCGCG TCAATACCGC TGCCGCGGTG GGCGACATCC GCCTGGCGCA GAGCGCCGCC
TTCGAGACGC AGGAAAGCCA GCCCGACGAC AACCCGCTGC ACCTGCAGCT CACGGACAAC
CTGCTGGCCT TCAGCGACCA CGCCGGCATG CTCTCGCGGC ACAGCGACCT GGGCGCCATC
GACGAAGATC AGGCCGAGGC CCGGCTGCAC CTGGCCATCA GCCCGCGCCT GTCGCTGGAC
CTGGACGCGA GCCGCATCCA GCGCCGCGTC ACGGCGCCCG ACCAGCTGCG CGACGCACCC
GGCGAGGACA TCGCGGGCGC GCTGCTGCGC TGGGGCCATG CCGACGGCGA GACCCGGCTG
CGCGTGGCCA GCCGCCGGGG GTACGCGGAC ACCACGCCCC TGTCCATCGA GCACGAGCAG
CGCCTGGACA ACCGCCTGTC CCTGCGCGGC GAACTGGGCT GGCACCTGCC CAGCGAGGAA
AGCCTGGCGC TGCGCCTGGG CGGCATGAAG ACGCGCGTGG CCGCTCACCT GCGCTACCAG
GCCACGCGCC AGGACAGCCT GCTGCTGTCG CAGTGGAGCG AGCAGTACCG CCTGCAGACG
GGCGCCGAGG TGGGCCGCGG GCGCCACACC GCGATCGAAT ACTCGCACGC CTACCGCCAG
GACGCGCCCA CGTGGGAATG GGGCGCCTTC TGGTCCACCC ACCGCTTCGA GCGCCGCCAC
CCCTTCTTCC TGGGCCAGCA GGGCCAGGAC TTCCTGCAGC GCTTCGCGCC CGCGGGCGTC
ACGAGCCTGG GCCTGGACTA CTTCCTGCCC GAGAGCTTCC AGTTCTACGG CGTGCGGCTG
TCCACCAACA TGCGCTTCGA GCAGGACCAC ACGCGCGCGC TGCGGCCCTT CGCGAGCGTA
AGCCTCACCC GGCACAGCCT GCTGGGCGCG GGCTACGACC TGCGCCTGGG GCTGGCCGGC
AGCGTGCTGG GCCCGGACCA TTTGCGCCTG AGCTTCGGCC TGGGCAAGTC AGGCGTGCAG
TCCCTGGGAC TCACGCGCGT GCTGGAACTG TCGTACCGGC TTCATTTTTA A
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| Protein sequence | MPPPRSRSSA QSVERPILAP NWLVALLTAM ACGALWLLYP RQDLEQRLAT SGETELSTAY
LNNLLRSDPD NPRLRLLLAQ RQIAHGDTAS ARTTLQPALD SADPALRKEA LWAQWDLLHS
EYRHVPDREP DRRLALLDGL RRHIRQLAQE GWPQERQDRL AALASQFGEQ EIALALSRRE
APQDPREAAL YYEREAREAL ARGDYEGCAQ LYLSARDSTP DPAQAKAYYG AAIAALRSGN
QTAAALELAE RELGPLADDP QTLFMLTQLA RAAGRPDVAE HYVRRLLRMA LERQATQWAS
AEQDFALRPV AWRPQPPAAL AGPVFDDGAD LLVHPALRLA QQVADKASAR PSPALPFDDK
TYALGYEVFL ENRKLEDAWT IANAAVRQNP ADMRWRERLA QVSEWTQRPG IALENWLVLA
RQTNQDAAWQ AVLRLAPGQF DDAALVQALR HQLRSRSGDP RLMRALVDAQ ERLGEPQPAI
DYLRQHAQDP EALELLAQLA ERAGQPDLAL QTWRQLLADP AQITPERAMH AAVLALQHRQ
PELGLQWLQA VQDHPPASAE AAAELWRFTG DLARSRARDQ LAIAAYRKLV DAQHADVADY
DALIGLLQQD QPLEAAKVAL LAWQQHDEPR HLIEALTLYS SRNQWNEFAH ALDQLDPTPD
AARHSLARMR RSGQFLRLVG GYHHNAGRFA EARQYYEEGL AIDPASSDMR QALLWLLIDS
NDAASIRRLL AAHEQAWSAD EDLHEALAAA YQALSLPQVA LHRYLSPHVA EREGDFLWLM
NYADALEQNQ EADRAWRLRR HLLSQQWQEG RNGRRLTPAQ ARQRWLTEEG LEATQRVARA
RLILLQRPGD PAQEVLRELL RLDRDAQGGY SNAAAETAIG WLQDAGEYTA ERGFLWHQYA
RSRSLRTNRP LWAEITVALA EDDKAAAGQL LQEFDERLPR YDRVNTAAAV GDIRLAQSAA
FETQESQPDD NPLHLQLTDN LLAFSDHAGM LSRHSDLGAI DEDQAEARLH LAISPRLSLD
LDASRIQRRV TAPDQLRDAP GEDIAGALLR WGHADGETRL RVASRRGYAD TTPLSIEHEQ
RLDNRLSLRG ELGWHLPSEE SLALRLGGMK TRVAAHLRYQ ATRQDSLLLS QWSEQYRLQT
GAEVGRGRHT AIEYSHAYRQ DAPTWEWGAF WSTHRFERRH PFFLGQQGQD FLQRFAPAGV
TSLGLDYFLP ESFQFYGVRL STNMRFEQDH TRALRPFASV SLTRHSLLGA GYDLRLGLAG
SVLGPDHLRL SFGLGKSGVQ SLGLTRVLEL SYRLHF
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