Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0756 |
Symbol | |
ID | 4670925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 797978 |
End bp | 798733 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639837879 |
Product | ABC-2 type transporter |
Protein accession | YP_985076 |
Protein GI | 121593180 |
COG category | [S] Function unknown |
COG ID | [COG1511] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.97763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.423446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCT GGCAGACCCT GTTCTACAAG GAAGTGCTGC GCTTTTGGAA GGTGGGCTTC CAGACCGTGG CGGCGCCGGT GCTCACGGCG GTGCTGTACC TGCTGATCTT CGGCCATGTG CTCGAAGACC ATGTCAAGGT CTATGACCGG CTGAGCTACA CCGCCTTCCT GGTGCCCGGC CTGGTGATGA TGAGCGTGCT GCAGAACGCC TTTGCCAACA GCTCGTCCAG CCTGATCCAG AGCAAGATCA TGGGCAGTCT GGTGTTCGTG CTGCTCACGC CGCTGTCGCA CCGTGCCTGG TTCGCGGCCT ACGTGGGCTC GTCCATGGTG CGCGGCCTGG TGGTGGGCCT GGGTGTGTTC ATCGTCACGC TGGCGTTCGC TACGCCGCAG TTCGCCGCGC CGCTGTGGAT TCTTGCGTTC GCGCTACTGG GCGCGGCGCT GCTGGCCACG CTGGGGGTCA TCGCGGGGCT GTGGGCCGAC AAGTTCGACC AGATGGCGGC ATTCCAGAAC TTCATCATCG TGCCCATGAC CTTCCTGTCG GGCGTGTTCT ATTCGGTGCA ATCGCTGCCG CCGTTCTGGC AGGGCGCAAG CCACCTGAAC CCGTTCTTCT ACATGATCGA CGGCTTCCGC TACGGCTTCT TCGGCGTGAG CGACGTCTCC CCCTGGCTCA GCCTGGGCGT CGTCAGCCTG GCATGGGCGC TGGTCAGCTT GTTGGCGCTG CACCTGCTGC GCACGGGCTA CAAAATCAGG AACTGA
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Protein sequence | MIGWQTLFYK EVLRFWKVGF QTVAAPVLTA VLYLLIFGHV LEDHVKVYDR LSYTAFLVPG LVMMSVLQNA FANSSSSLIQ SKIMGSLVFV LLTPLSHRAW FAAYVGSSMV RGLVVGLGVF IVTLAFATPQ FAAPLWILAF ALLGAALLAT LGVIAGLWAD KFDQMAAFQN FIIVPMTFLS GVFYSVQSLP PFWQGASHLN PFFYMIDGFR YGFFGVSDVS PWLSLGVVSL AWALVSLLAL HLLRTGYKIR N
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