| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0746 |
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| Symbol | |
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| ID | 4672820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 789871 |
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| End bp | 790833 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639837869 |
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| Product | spermidine synthase |
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| Protein accession | YP_985066 |
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| Protein GI | 121593170 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG CCCCCACCGC GCAGGCCACG CGCTACGTGG CCGAGCGCCT GAACGCCGAC
TTCGGCTTTT ACCTAAGCGA CCGCCGCCTG CTGGCCGAAC GCCAGTCGGC CTGGCAGCAC
ATCGAGGTCT TCGACAACCC GCAGTTCGGC CGCGTGATGC GCATCGACGG CTGCTTCATG
ACCAGCGAGC GCGACGAATT CTTCTACCAC GAGCCGATGG TGCACCTGCC GGCCATCGCC
CACCCCGGCG TGCGCCGTGC GCTGGTCGTG GGCGGGGGGG ACGGCGGCGC CGCCGAGGAG
TTGCTGAAGC TGCCCGGCAT CGAGCAGGTG GTGCTGGCCG AGCTGGATGG CGAGGTGATT
GCCATGGCCC GCGATTGGCT GGGCCAGATC CACCGTGGCG CCTTTGACGA CCCGCGCCTG
GAGGTGCGCC TGGGCGACGC GCGCGCCTTC ATCGGCCAGA CCGAGGAGCG CTTCGACCAG
ATCGTCCTGG ACCTGACCGA CCCCTTCGGC CCCGCCGTGG AGCTGTACAC CGTGGAGTTC
TACGCCGCCT GCCGCCGCGC GCTGAACCCG GGCGGCGTGC TTTCGCTGCA CCTGGGCTCG
CCCGTGCACC TGCCCGAGAG CCTGGGGCGC ATCGCCGCCT CGGTGCGCGC GGTGTTTCCC
ATCTTCCGGC CCTACCTGCA GTACGTGCCG CTGTACGGCA CGTTGTGGTG CATGGGCATG
GCATCGGACA GCACCGACCC CGCCCGGCTC AGCGCCGACG AGGTGGACGC ACGCATCGCC
GCGCGCGGCC TGGGCGATCT GCAGCTGTAC AACGGGGCCG TGCACCATGC GCTGCTGGCG
CAGCCGAACT TCGTGCGTGC GCTGCTGGAT CGGCCTGCGC TGCCGCTGCA CAGCGGGGAT
GTGCTGGAAG AGGTGCGGGA CCCGGCGGAG TTGCCGGAGG TGGTGGTGTC CGCTGCCGCG
TAA
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| Protein sequence | MSGAPTAQAT RYVAERLNAD FGFYLSDRRL LAERQSAWQH IEVFDNPQFG RVMRIDGCFM
TSERDEFFYH EPMVHLPAIA HPGVRRALVV GGGDGGAAEE LLKLPGIEQV VLAELDGEVI
AMARDWLGQI HRGAFDDPRL EVRLGDARAF IGQTEERFDQ IVLDLTDPFG PAVELYTVEF
YAACRRALNP GGVLSLHLGS PVHLPESLGR IAASVRAVFP IFRPYLQYVP LYGTLWCMGM
ASDSTDPARL SADEVDARIA ARGLGDLQLY NGAVHHALLA QPNFVRALLD RPALPLHSGD
VLEEVRDPAE LPEVVVSAAA
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