| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0716 |
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| Symbol | |
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| ID | 4671897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 756737 |
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| End bp | 758032 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639837839 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_985036 |
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| Protein GI | 121593140 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.670894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATC CCGTTCTGCC CGGCCACCCC CACTTGCACT ACCACGACCA AGCGCTTCAG
TTGGAGGGCC TTCGCCTTGC CGACCTGGCC CGGGAGTTCG GCACGCCCCT CTACGTCTAT
TCCCACGCAG CCATGCTGGA CGCCCTGGGG GCGTACCAGC GCGGGTTCGC TGGGCGCAAG
GTGCAGATCT GCTATGCCAT GAAAGCGAAC TCGTCGCTCG CTGTCCTGCA GCTTTTCGCA
CGCCATGGCT GCGGCTTCGA CATCGTTTCT GCCGGCGAAC TGCAACGCGT GATTGCAGCC
GGCGGCGACC CGGCGAAGGT GATCTTTTCC GGCGTGGGCA AGACGCGCGC AGAAATGCGC
CAGGCGCTGG AGGTCGGCAT TGGCTGCTTC AACGTGGAAA GCGAGGCAGA ACTCGACGTG
CTGAGCGAAG TGGCCCAATC CATGGGATTG CGCGCACCGA TCAGCATTCG TGTCAATCCC
AACGTGGACG CCAAGACCCA CCCCTACATT TCCACGGGCC TCAAGGGCAA CAAGTTCGGT
ATCGCCCATG AACGCACGGT TGCCACCTAC CAGCGCGCAG CCGCCCTGCC CGGCTTGCGC
GTGGTGGGCA TCGATTGCCA CATCGGCTCC CAGATCACGG AAGAGAGCCC GTATCTGGAC
GCCATGGATC GCATGCTGGA CCTCGTGCAA GCCATCGAGG CCGCAGGCAT CGCGGTCCAC
CACATCGATT TTGGCGGTGG TTTGGGCATC GATTACAACG GCGACACGCC ACCACGGGCC
GACGCGCTGT GGGCCAAGCT GTTGGCCAAA CTGGACGCGC GCGGCTACGG TGACCGCCAA
TTGATGATCG AGCCCGGTCG CTCCTTGGTG GGCAACGCCG GTGTTTGCCT GACGGAGGTG
CTCTACCTCA AGCCCGGCGA GCAAAAGAAC TTCTGCATCG TCGATGCGGC CATGAACGAT
TTGCCGCGTC CGGCGATGTA CCAGGCCTAC CACGCCATCG TGCCCCTGCA GGCAACAGCC
CCCACGGCCG TGTCGCACGT GTATGACGTC GTCGGACCGA TCTGCGAAAG CGGGGACTGG
ATCGGCCGTG ACCGCAACCT GGCGGTGGCA GCGGGCGATA TGCTGGCGGT GCTGTCCGCC
GGGGCGTACT GCAGTTCCAT GGGGAGCACC TACAACACCC GCCCCCGACC CGCCGAGGTG
CTGGTGGACG GAGCGCGAGC CCACCTCATC CGCACGCGCG AAAGCGTGAA CGACATTTTC
CGCAGCGAAA AGCTGGTACC GCAGGGCAAC CCTTGA
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| Protein sequence | MTHPVLPGHP HLHYHDQALQ LEGLRLADLA REFGTPLYVY SHAAMLDALG AYQRGFAGRK
VQICYAMKAN SSLAVLQLFA RHGCGFDIVS AGELQRVIAA GGDPAKVIFS GVGKTRAEMR
QALEVGIGCF NVESEAELDV LSEVAQSMGL RAPISIRVNP NVDAKTHPYI STGLKGNKFG
IAHERTVATY QRAAALPGLR VVGIDCHIGS QITEESPYLD AMDRMLDLVQ AIEAAGIAVH
HIDFGGGLGI DYNGDTPPRA DALWAKLLAK LDARGYGDRQ LMIEPGRSLV GNAGVCLTEV
LYLKPGEQKN FCIVDAAMND LPRPAMYQAY HAIVPLQATA PTAVSHVYDV VGPICESGDW
IGRDRNLAVA AGDMLAVLSA GAYCSSMGST YNTRPRPAEV LVDGARAHLI RTRESVNDIF
RSEKLVPQGN P
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