| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0712 |
|---|
| Symbol | |
|---|
| ID | 4671671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 752686 |
|---|
| End bp | 754020 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639837835 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_985032 |
|---|
| Protein GI | 121593136 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.189956 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAG CCACGACCAC GCTCACGTTG AGCGAAGGGT ATTTCGCACG CCGCAGCTGG
TGGGACTGGC TGTTTGCGTT GTTGGTGGTC GCGGGGGGCG TGTTCGCGCT GCAGCGCTAT
GCGGCGTACA TGGATGTGTA TGAGAAGGCC ATTTTGCTGG GCTCCATTCC CAGCGTGATC
TGGCTGGGCT GGTTCTGGCG CCCGCTGAGC ACACTGATGC TGATGGTGGC CGCGTGCTCG
CTGCTGGCCA TCGGGCTGTA CCAGAACAAT GGCGCGGGCG ACCTGGCGCG CGCGGACACG
GTCTTCGGAC TCAAGTACTT TCTGTCGAGC CAGTCGGCCA TCCTGTGGAT GAGCATGCTG
TTCTTCATGA GCACCGCGTT CTATTGGGTG GGCATGCTCT CGCGCGGTCA AGGGCAGACG
ATGATGCGCA TCGGCTCGCG CATTGCGTGG GTGGCCGTGG CGCTGGCATT GATTGGCACC
ATGGTGCGCT GGTACGAAAG CTACCAGATC GGCCCGGATA TCGGCCACAT CCCGGTGAGC
AACCTCTACG AGGTGTTCGT CATGTTCTGC TGGATGACGG CCGTGTTCTA CCTGTACTAC
GAGGAGCAGT ACGAAACCCG CGCGCTGGGC GGCTTCGTGA TGCTGGTGGT GAGCGCCGCC
GTGGGCTTTC TGCTGTGGTA CACGGTCGTG CGCGAGGCGC ATGAGATCCA GCCGCTGGTG
CCCGCGCTCA AGAGCTGGTG GATGAAGCTG CATGTGCCGG CCAACTTCAT CGGCTACGGC
ACCTTCGCGC TGTCAGCCAT GGTGGCCTTT GCTTACCTGA TCAAACAGCA GGCGAGCGAA
ACGCGCTGGT GGAAACTGGC ACCGCTGTGG CTGTTGGGCG TGGTGCTGTG CTTTGAGCCC
ATCGTCTTTC GCCAGGGCGC GGCCGACAAC GGCGGTGGCT ACTGGATGGT GTATTTCGGC
GTTTCTGCGC TGATCGTGGC GGGCATCTTG CTGGCGCGCC GGCGCATTGC CGAGCGGTTG
CCGTCCTTCG AGATCCTGGA CGATGTGATG TACAAGTCCA TCGCCGTGGG CTTTGCGTTC
TTTACCATCG CCACGGTCCT GGGAGCGCTG TGGGCCGCGG AGGCCTGGGG CGGTTACTGG
AGCTGGGACC CCAAGGAAAC CTGGGCGCTG ATCGTGTGGC TCAACTACGC GGCATGGCTG
CACATGCGGC TGATGAAGGG TTTGCGCGGC ACCATGTCGG CGTGGTGGGC GCTGGTGGGC
CTGGCGGTGA CCACCTTCGC CTTTCTGGGC GTGAACATGT TCCTGAGCGG GCTGCACAGC
TACGGAACCT TGTAA
|
|---|
| Protein sequence | MNTATTTLTL SEGYFARRSW WDWLFALLVV AGGVFALQRY AAYMDVYEKA ILLGSIPSVI
WLGWFWRPLS TLMLMVAACS LLAIGLYQNN GAGDLARADT VFGLKYFLSS QSAILWMSML
FFMSTAFYWV GMLSRGQGQT MMRIGSRIAW VAVALALIGT MVRWYESYQI GPDIGHIPVS
NLYEVFVMFC WMTAVFYLYY EEQYETRALG GFVMLVVSAA VGFLLWYTVV REAHEIQPLV
PALKSWWMKL HVPANFIGYG TFALSAMVAF AYLIKQQASE TRWWKLAPLW LLGVVLCFEP
IVFRQGAADN GGGYWMVYFG VSALIVAGIL LARRRIAERL PSFEILDDVM YKSIAVGFAF
FTIATVLGAL WAAEAWGGYW SWDPKETWAL IVWLNYAAWL HMRLMKGLRG TMSAWWALVG
LAVTTFAFLG VNMFLSGLHS YGTL
|
|---|
| |