| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0698 |
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| Symbol | |
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| ID | 4670510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 738191 |
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| End bp | 739357 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639837821 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_985018 |
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| Protein GI | 121593122 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.814063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00133482 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACACGA CCCCTCGCCG TCTCTTTCCC TGCCTCCTCT CCCGCGACCC CTACCGGCGT
GTGCGCGTCG GCATGGCGCT GCTCGCGCTG CTGCTGATGA GCTCCAGCGC CCTGGTGATG
CTGTTGCTGC ACCACCCCAG CGCAAACCAC CACCTGGACG CTGTGCGGTG GTGGGCGGCA
CTTTCGGTGG GGGGGCTCGC AGTCATCACG CTGCTGATCC GCACCGGCTG GTCCGAGCGG
CTGCGCGATC CGTCCCTGAC CCTGGTGCAA ATGGCGTGGA CCATCACCAG CGGCGCCGTG
GCCTACGTGC TGGCAGGGGA AGGCCGCGGC GTGGTGCCCT CCGTGCTGGC CATGATCCTG
TTCTTCGGCG CGCTGGGCCT GCCACCGCGC CAGGTCGTGG GCATCGGGCT GTATGCGATG
GCGGCGTTCT CGGTGGCGGT GGTCGTCTCG CCGCGCTTTT ACGCAACATC GTTCGACACC
ATGGATGGCG CCTACGCAGC CATGATCCTG ATCGTGCTGG GCGGGTGCAT GGTGGTGAAC
CTGCGCGTGC AGCAGATGCG CCAGCGCCTG GACCGGCAAC GTGAGGCGCT GGCCGAAGCC
CTCGCGGAAA ACCGCGCGCT GGCCATGCGC GACGAACTCA CGGGTCTGTA CAACCGCCGC
GCCATGGTCG AGCTGATCCA GCTGGAGTGC CGGCGCCGCC GCCGGGGGCA GGGCACGTTG
TTGTTCGCCA TGATCGATGT GGACCATTTC AAGCGCGTCA ACGACCACCA CGGCCACGCC
ATGGGTGACC ATGTGCTGCG GGTGTTCGCC GACGCCCTGC GCGCCAATGT GCGCGAAACC
GATGTGCTGG CGCGCTGGGG CGGCGACGAG TTCCTGCTGC TGCTCAGCGA CATCGAACCA
CGCAGCGCCC AGACCCTGCT GGAGCGCACG CGCGAAGCCA TCGCTGCCCT GCCCGTGCCC
AACGCACCGC CGGACCTGCG CCTGAGCATG TCCGCCGGCC TGGCGCTGCA CATGCCCCAT
TCGTCACCCC AGGAAACGCT GGAGCGTGCC GACCAGGCGC TCTACGCCGC CAAGGACCAG
GGTCGCAACC GGGTGGCCCT GGCTCCAGAA CTCCAGCCGG CGCCTCTAGA TGATGCGCCG
GCCATGCCCC AGGCAGCGCG CGCCTGA
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| Protein sequence | MHTTPRRLFP CLLSRDPYRR VRVGMALLAL LLMSSSALVM LLLHHPSANH HLDAVRWWAA
LSVGGLAVIT LLIRTGWSER LRDPSLTLVQ MAWTITSGAV AYVLAGEGRG VVPSVLAMIL
FFGALGLPPR QVVGIGLYAM AAFSVAVVVS PRFYATSFDT MDGAYAAMIL IVLGGCMVVN
LRVQQMRQRL DRQREALAEA LAENRALAMR DELTGLYNRR AMVELIQLEC RRRRRGQGTL
LFAMIDVDHF KRVNDHHGHA MGDHVLRVFA DALRANVRET DVLARWGGDE FLLLLSDIEP
RSAQTLLERT REAIAALPVP NAPPDLRLSM SAGLALHMPH SSPQETLERA DQALYAAKDQ
GRNRVALAPE LQPAPLDDAP AMPQAARA
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