Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0689 |
Symbol | |
ID | 4670885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 727047 |
End bp | 727958 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837812 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_985009 |
Protein GI | 121593113 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.487153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0364966 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACAAA CGCTCTTGCG CTGGTACGAC AGCGACGTGG CCCACAGCTT TCGCACCTCG CCCGTGGCCA TCATCGCGGC GCTGATTGCC GCCGTGTGCG TGTTCTGCTC CATCTTTGCC GGCTGGGTGG CGCCACACAA CCCGTTCGAC CTGAGCACGC TGGAGCTGTC GGACGCGCGC TTGCCGCCCG TGTGGCAGGC CGAAGGCACC TGGAAGTACG CCCTGGGCAC CGATGACCAG GGCCGCGACA TCCTTTCGGC GCTGATCTAC GGCGCGCGCA TCTCGCTGGT GGTGGGCCTG GCCTCCGTGG CGCTGTCGGT CGTCGTGGGC GTGGCGCTGG GGTTGGTGGC GGGCTTTCGC GGCGGATGGG TGGACGGCGT GCTCATGCGC CTGTGCGACG TGATGCTGTC GTTCCCCGCC ATCCTGATCG CGCTGCTGAT TGCCGGCGTG GGGCGTGCGG TGTTCCCCAA CGCGCCCGAT TCGCTGGCCT TCGGCGTGCT GATCCTGTCG ATCTCGCTCA CGGGCTGGGT GCAGTACGCG CGCACCGTGC GCGGCTCCAC GCTGGTGGAG CGCAACAAGG AATACGTGCA GGCCGCGCGC GTCACCGGCG TGTCGCCGCT GCGCATCATG CGCAAGCATG TGCTGCCCAA TGTGCTGGGG CCGGTCATGG TGCTGGCCAC CATCCAGGTG GCCACTGCCA TCATTACCGA AGCCACGCTG TCCTTCCTGG GAGTGGGCGC GCCGCCCACG TCGCCCTCGC TGGGCACGCT GATCCGCATC GGCAACGACT ACCTGTTCTC CGGCGAGTGG TGGATCACTG TCTTCCCCGG CGTGATGCTG GTGCTGATCG CGCTGTCCGT GAACCTGCTG GGCGACTGGC TGCGCGATGC ACTCAACCCG CGCCTGCGCT GA
|
Protein sequence | MKQTLLRWYD SDVAHSFRTS PVAIIAALIA AVCVFCSIFA GWVAPHNPFD LSTLELSDAR LPPVWQAEGT WKYALGTDDQ GRDILSALIY GARISLVVGL ASVALSVVVG VALGLVAGFR GGWVDGVLMR LCDVMLSFPA ILIALLIAGV GRAVFPNAPD SLAFGVLILS ISLTGWVQYA RTVRGSTLVE RNKEYVQAAR VTGVSPLRIM RKHVLPNVLG PVMVLATIQV ATAIITEATL SFLGVGAPPT SPSLGTLIRI GNDYLFSGEW WITVFPGVML VLIALSVNLL GDWLRDALNP RLR
|
| |