| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0625 |
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| Symbol | rplM |
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| ID | 4674282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 658680 |
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| End bp | 659108 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639837751 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_984948 |
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| Protein GI | 121593052 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACAT TCAGCGCAAA GCCCGCTGAG GTCGTGCACG AGTGGTTTGT GATTGACGCC
ACCGACAAGG TGCTCGGCCG GGTAGCCAGC GAAGTTGCCC TCCGTCTGCG CGGCAAACAC
AAAGCCATTT ACACGCCTCA CGTTGATACC GGCGACTACA TCGTCATCAT CAACGCCTCC
AAGCTCAAGG TCACCGGCAC CAAGTCCCTG GACAAGGTGT ACTACCGCCA CTCGGGTTAT
CCCGGCGGTA TCACGGCCAC GAACTTCCGC GATCTGCAAG CCAAGCACCC CGGCCGCGCG
CTGGAAAAGG CCGTCAAGGG CATGCTGCCC AAGGGCCCGC TCGGCTACGC CATGATCAAG
AAGCTCAAGG TGTACGGCGG CGCGGAACAT CCGCACACCG CTCAGCAGCC TAAAGCGCTG
GAAATCTAA
|
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| Protein sequence | MSTFSAKPAE VVHEWFVIDA TDKVLGRVAS EVALRLRGKH KAIYTPHVDT GDYIVIINAS
KLKVTGTKSL DKVYYRHSGY PGGITATNFR DLQAKHPGRA LEKAVKGMLP KGPLGYAMIK
KLKVYGGAEH PHTAQQPKAL EI
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