| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0617 |
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| Symbol | prfC |
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| ID | 4674429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 648770 |
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| End bp | 650395 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639837743 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_984940 |
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| Protein GI | 121593044 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTACG CCCCAGAAAC CCGGCGCCGC CGGACTTTTG CCATCATCTC CCACCCCGAC
GCCGGCAAGA CCACGCTGAC GGAAAAGCTG CTGCTGTTCT CCGGCGCCAT CCAGATCGCC
GGCGCCGTGA AGGGCCGCAA GGCCAGCCGC CACGCCACGT CCGACTGGAT GGAGATCGAG
AAGCAGCGCG GCATCTCGGT GGCGTCGAGC GTGATGCAGA TGAGCTACCG CGACCATGTC
ATCAACCTGC TGGACACGCC GGGCCACAAG GACTTCTCGG AAGACACCTA CCGCGTGCTC
ACGGCCGTCG ATTCGGCCCT GATGGTGATC GACGCGGCCA ACGGCGTGGA GGCGCAGACG
CGCCGCCTGA TCGAGGTCTG CCGCCAGCGC GACACGCCCA TCATCACCTT CGTCAACAAG
ATGGACCGCG AGGTGCGCGA CCCGCTCGAC ATCCTCGACG AGGTGGAGCG TGAGCTGGGC
ATGCCCTGCT GCCCCATCAC CTGGCCCGTG GGCCAGGGCA AGAGCTTCGG CGGCATCATC
AACCTGCGCA CGCAAAGCAT GACGGTCTTT CAGCCCGGCA GCGAAAAGCG CCCGCAGGAC
TTCGAGGTCA TTCCTCTTTC CGACGCCGAC AAGCTGCGCG CGCGCTTCGG TCAGGCCTTT
GACGACGCAC TGGAAAGCAT GGAGCTGGCG CAAGGTGCCT CGGCGCCCTG GGACCATGAA
GCCTTCCTGG CTGGCAAGCT CACACCGGTG TTCTTCGGCT CGGGCGTGAA CAACTTCGGT
GTGATGGAAG TGCTGGATGC GGTGGTGGAC ATGTCGCCCC CGCCCGGCCC GCGCAAGAGC
TCGCTCGTCG TCAACAAGCA GCCGGTGGAA AAAACCGTAC TGCCCGAGGA CGAGGGCTTT
TCGGGCGTGG TGTTCAAGGT GCAGGCCAAC ATGGACGCCA ACCACCGCGA CCGCATCGCC
TTCGTGCGCG TGGCCAGCGG CAAGTACACG CCCGGCATGA AGCTCAAGGT GCAGCGCACC
GCCAAGGAAC TGCGCCCCAC CAGCGTGGTC ACCTTCATGA GCCAGCGCCG CGAGGCGGTG
GAAGAGGCCT ACGCCGGCGA CATCATCGGC TTCACCACGC ACGGCGGCGT GCAGCTGGGC
GACACCATCA CCGACGGTGC CAACCTGCAG TTCACCGGCC TGCCGTTCTT CGCCCCCGAA
ATGTTCATGA CCGTGGTGCT GAAGAACCCG CTGCGCACCA AGCAACTACA GCAGGGCCTG
ATGCAACTGG GCGAGGAAGG CGCCATCCAG GTCTTCAAGC CCGAGGCCGG CGGCAACATG
CTGCTGGGTG CCGTGGGCCA GCTGCAGTTC GAAGTGGTGC AACACCGTCT GAACACCGAA
TACGACTGCG ACATCCGTCT GGAAGCCTGC CAGTACACGG GAGCCCGCTG GATCACTGCC
GACACGCCGG CCGAACTGCG CGAGTTCGAG AACGCCTACC CCATGCGCAT GGCGCGCGAT
GCGGCGGACA CGCTGGCCTA CCTGTGCACG AGCCCATATG ACGTACGGCT GGCGCAGGAG
CGGTTCCCGA AGATTCACTT CCATCCGCTG CGGGAGCATG CGGGGTTGGC GTTGCAGAAC
AGTTGA
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| Protein sequence | MSYAPETRRR RTFAIISHPD AGKTTLTEKL LLFSGAIQIA GAVKGRKASR HATSDWMEIE
KQRGISVASS VMQMSYRDHV INLLDTPGHK DFSEDTYRVL TAVDSALMVI DAANGVEAQT
RRLIEVCRQR DTPIITFVNK MDREVRDPLD ILDEVERELG MPCCPITWPV GQGKSFGGII
NLRTQSMTVF QPGSEKRPQD FEVIPLSDAD KLRARFGQAF DDALESMELA QGASAPWDHE
AFLAGKLTPV FFGSGVNNFG VMEVLDAVVD MSPPPGPRKS SLVVNKQPVE KTVLPEDEGF
SGVVFKVQAN MDANHRDRIA FVRVASGKYT PGMKLKVQRT AKELRPTSVV TFMSQRREAV
EEAYAGDIIG FTTHGGVQLG DTITDGANLQ FTGLPFFAPE MFMTVVLKNP LRTKQLQQGL
MQLGEEGAIQ VFKPEAGGNM LLGAVGQLQF EVVQHRLNTE YDCDIRLEAC QYTGARWITA
DTPAELREFE NAYPMRMARD AADTLAYLCT SPYDVRLAQE RFPKIHFHPL REHAGLALQN
S
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