| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0607 |
|---|
| Symbol | |
|---|
| ID | 4674673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 639927 |
|---|
| End bp | 640865 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639837733 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_984930 |
|---|
| Protein GI | 121593034 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCA AATGGCTCGA AGACTTCGTC AGCCTGGCAG AAACGCGCAG CTTCAGCCGC
TCGGCGCAAT TGCGCCATGT GACACAGCCC GCCTTTTCGC GGCGCATCCA GGCGCTGGAG
GCCTGGGCCG GCACCGATCT GGTGGACCGC AGTTCCTACC CCACGCGGCT GACGGCCGCG
GGCAACACGC TGTACGACCA GGCGCTGGAG GTGCTGCAGG CGCTGCAGAA CACGCGCGCC
ATGCTGCGCG CGCACACCAG CGCGGGCACC GACATGATCG AGTTCGCCGT GCCGCATACG
CTGGCGTTCA CTTTTTTCCC GGCCTGGGTG TCGGCGTTGC GGGCGGACTT CGGCCCGCTC
AAAAGCCGGC TGATCGCCCT GAATGTGCAC GACGCGGTGA TGCGCCTCGT GGAGGGCGGC
TGCGATCTGC TCATCTCCTA CCACCATCCA TCGCAGCCCC TGCAACTGGA CCCGGACCGC
TACGAGATGG TGACGCTGGG GCAGGAGGTA CTGGCCCCCT ACGCCAAGGC GGGCGCTGAT
GGTCAGCCGC TGTTTTGCCT GCCGGGCCGG CCTGGCGAGC CGCTGCCCTA CCTGGGGTAT
GCGCCGGGGG CCTACTTGGG GCGCGTGACG GAGCTGATCC TCAAGCAGGC GGGGACGGCC
ATCCACTTGG ACCGCGTGTA CGAAACGGAT ATGGCCGAAG GCCTGAAGGC CATGGCGCTG
GAAGGGCACG GCGTCGCCTT CCTGCCCTAC AGTGCGGTGA AGAAGGAACT GCGTTCGCGC
AAACTTCTGA GCGCGGCGCC GCCCGACGCG CAGGACCTGC AGATGGTGAT GGAAGTGCGC
GCCTACCGCG AAAAGCCCTC GCGCAAGGAG CCGGCCAAGG GCCTGGCCCA GTCCCTGTGG
ACGTACCTGC AGACGCGCGC CGGACAGAAC CCCATCTGA
|
|---|
| Protein sequence | METKWLEDFV SLAETRSFSR SAQLRHVTQP AFSRRIQALE AWAGTDLVDR SSYPTRLTAA
GNTLYDQALE VLQALQNTRA MLRAHTSAGT DMIEFAVPHT LAFTFFPAWV SALRADFGPL
KSRLIALNVH DAVMRLVEGG CDLLISYHHP SQPLQLDPDR YEMVTLGQEV LAPYAKAGAD
GQPLFCLPGR PGEPLPYLGY APGAYLGRVT ELILKQAGTA IHLDRVYETD MAEGLKAMAL
EGHGVAFLPY SAVKKELRSR KLLSAAPPDA QDLQMVMEVR AYREKPSRKE PAKGLAQSLW
TYLQTRAGQN PI
|
|---|
| |