| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0605 |
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| Symbol | |
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| ID | 4674706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 637813 |
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| End bp | 639111 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639837731 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_984928 |
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| Protein GI | 121593032 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.646578 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCA CGCTGCTCTT TGTCGCCTTC CTGGTGCTGA TGTTTGTGGG TGTGCCCATC
GGCGCCGCCC TGGGGTTGGC CGGCGCCGCC GCCATTGCGC TGGCCAATGC CGAGACACAA
TGGTTTGGCT TGCTCGCCGT GCCGCAAAAC TTCTACGCCG GGCTGGGCAA GTACCCGCTG
CTGGCGATTC CCATGTTCGT GCTGGTGGGC TCGATCTTCG ACCGCTCAGG CGTGGCGCTG
CGCCTGGTGA ATTTTGCCGT GGCGATCGTC GGGCGCGGAC CGGGCATGCT GCCGCTGGTG
GCAATTGCCG TGGCCATGTT CCTGGGCGGC ATCTCCGGCT CGGGACCGGC CAACGCGGCC
GCCGTGGGCG GGGTGATGAT CGCGGCCATG AGCCGCGCGG GCTACCCCGG CAGCTTCTCG
GCGAGTGTGG TGGGGGCGGC CGCAGCCACG GACATCCTCA TCCCGCCTTC GGTGGCGTTC
ATCATCTATT CGGTGCTGGT GCCCGGGGCC TCGGTGCCGG CCTTGTTCGC GGCAGGCATG
GTGCCGGGCG TGCTGGCGGG CATTGCGCTC ATCGTGCCGG CCGTGTGGAT GGCGCGCCGC
CACCGCATGG GCCACCTGGA AGCCGACATG CCCCGCCCGC CGTTCTGGCG CAGCCTGCGC
GAAGCCTCCT GGGGCCTGGC CGCGCCGGTG CTGATCCTGG GCGGCATGCG CGCGGGCTGG
TTCACACCCA CCGAGGCCGC CGTGGTGGCC GTGTTCTACG GCCTGTTCGT GGGCATGGTG
ATCCACCGCA CCATTCGGGT GCGCGACCTG TTCACCATCC TGCGCGAAGC GGGCGAGCTG
TCGGCCGTGA TCCTGATCGT GGTGTCGCTG GCGGGCATCT TCGCGTTCTC GCTGTCCACA
CTGGGCGTGA TCGACCCGGT GGCCAACGCC ATCGTGAACT CGGGCCTGGG CGAATACGGC
GTGCTGGCGC TTTTGATCCT GCTGCTCATC ACCGTGGGCA TGTTCCTGGA CGGCATCTCG
ATCTTCCTGA TCTTCGTGCC GCTCTTGCTG CCCATCATGC AGCACTACCA GTGGGACCCG
GTGTGGTTCG GCGTGATCCT CACCCTGAAG GTCGCACTGG GCCAGTTCAC GCCGCCGCTG
GCCGTGAACC TGATGGTCAG CTGCCGCATC GCAGGCGTGC GCATGGAATC CACCGTGCGC
TGGGTCGGCC CCATGCTGCT GGCCATGTTC CTGGTGATGG TGGCCGTGAT CGCTTTCCCG
CAGTTGGCCC TGTGGCTGCC TGCCCAGCTG GGCTATTGA
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| Protein sequence | MIATLLFVAF LVLMFVGVPI GAALGLAGAA AIALANAETQ WFGLLAVPQN FYAGLGKYPL
LAIPMFVLVG SIFDRSGVAL RLVNFAVAIV GRGPGMLPLV AIAVAMFLGG ISGSGPANAA
AVGGVMIAAM SRAGYPGSFS ASVVGAAAAT DILIPPSVAF IIYSVLVPGA SVPALFAAGM
VPGVLAGIAL IVPAVWMARR HRMGHLEADM PRPPFWRSLR EASWGLAAPV LILGGMRAGW
FTPTEAAVVA VFYGLFVGMV IHRTIRVRDL FTILREAGEL SAVILIVVSL AGIFAFSLST
LGVIDPVANA IVNSGLGEYG VLALLILLLI TVGMFLDGIS IFLIFVPLLL PIMQHYQWDP
VWFGVILTLK VALGQFTPPL AVNLMVSCRI AGVRMESTVR WVGPMLLAMF LVMVAVIAFP
QLALWLPAQL GY
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