| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0604 |
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| Symbol | |
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| ID | 4674080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 636748 |
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| End bp | 637779 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639837730 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_984927 |
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| Protein GI | 121593031 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.639711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC GCACTTTCCT CACTTCCGCC GTCGCCGCTG CTGCGGCCCT TGCCTTCGGC
ACACCCGCGC TGGCGCAGAA CTACAAGAGC GAATACCGCA TGTCGCTGGT ACTGGGCACC
GCCTTCCCGT GGGGCAAGGG CGGCGAGATC TGGGCACAGA AGGTCAAGGA GAAAACCCAG
GGCCGCATCA ACATCAAGCT CTACCCGGGC GTGTCGCTGA TCCAGGGCGA CCAGACACGT
GAGTTTTCCG CGCTGCGCCA GGGCGTGATC GACATGGCTG TGGGCTCCAC CATCAACTGG
TCGCCCCAGG TGAAGGCGCT GAACCTGTTC TCGCTGCCCT TCCTGTTCCC CGACTACGCG
GCTGTCGATG CGGTCACACA GGGCGAAGTC GGCAAGAGCA TCTTTCAGAC GCTGGAAAAG
GCCGGCGTGG TGCCACTGGC CTGGGGTGAG AACGGCTACC GCGAGATCAG CAACTCCAAG
CACGCCATCA AGAGCCCCGC CGACCTCAAG GGTCTGAAGA TCCGCGTGGT GGGCTCGCCC
CTGTTCCTCG ACACCTTCAC CGCGCTGGGC GCCAACCCCA CGCAGATGAG CTGGGCCGAC
GCACAGCCCG CCATGGCCAG CGGCGCCGTG GACGGCCAGG AGAACCCCAT CGCCGTGTAC
CAGGCCGCCA AGCTGCACAC CGTGGCACAG AAGCACGTGA CCATGTGGGG CTACATGAAC
GACCCGCTGA TCTTCGTGGT GAACAAGGAC GTGTGGAACA GCTGGACGCC CGCCGACCGC
GAAGCCGTCA AGCAAGCCGC CATCGAAGCC GGCAAGGAAG AAATTGCCAT CGCGCGCAAG
GGCATGGTCG AGGCCGACAA GCCCCTGCTC AAGGACATCG CCGCCAATGG CGTGACCGTG
ACGCAGCTGA GCCCCGCCGA GCGCGACGCC TTCGTGAAGG CCACGCGCCC CGTGTTCGAG
AAGTGGAAGG GCCAGATCGG CGCCGACTTG GTGAGCGCAG CCGAGAAGGC GATTGCGGCG
CGCAAACAGT AA
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| Protein sequence | MKLRTFLTSA VAAAAALAFG TPALAQNYKS EYRMSLVLGT AFPWGKGGEI WAQKVKEKTQ
GRINIKLYPG VSLIQGDQTR EFSALRQGVI DMAVGSTINW SPQVKALNLF SLPFLFPDYA
AVDAVTQGEV GKSIFQTLEK AGVVPLAWGE NGYREISNSK HAIKSPADLK GLKIRVVGSP
LFLDTFTALG ANPTQMSWAD AQPAMASGAV DGQENPIAVY QAAKLHTVAQ KHVTMWGYMN
DPLIFVVNKD VWNSWTPADR EAVKQAAIEA GKEEIAIARK GMVEADKPLL KDIAANGVTV
TQLSPAERDA FVKATRPVFE KWKGQIGADL VSAAEKAIAA RKQ
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