Gene Ajs_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0600 
Symbol 
ID4673921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp633373 
End bp633927 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content67% 
IMG OID639837726 
Producthypothetical protein 
Protein accessionYP_984923 
Protein GI121593027 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.927633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.296784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGC AAAACCCCTT CTTTGGCAAA CGCGAACCCG ACACTTTCCA ATCCCGCCAG 
CCTTCGTCAG CGCTGGGCGG CACCACCACC ACCGCAAGCA CCCCAACCGC CGCTCCCGCA
ACCAGAGCCG CTGTGTCCAC GGCCTCCAGC GCCACGGCCG AGGGCAGCGG CAGCAAGCTG
ACCGTGGGCC CCAACATCAA GCTCAAGGGT GTGGAGATCA CCGATTGCGA CACCCTCGTC
GTGGAAGGCA CGGTGGAGGC CACCATGGAT TCGCGCGTGA TCCAGATCAC CGAGCAGGGC
GCGTTCCGCG GCTCCGCCGA GATCGACATT GCCGAAATCC ACGGCGAGTT CGACGGCACG
CTCACCGTGC GCCAGAAGCT GGTGATCTTC AGCACCGGCA AGGTGAGCGG CAAGATCCGC
TACGGCAAGG TGGTGATCGA AGAGGGTGGC CAGCTCTCCG GCGAGATCGA GGTGGGCCTG
GGTGGTGGCG CGCGCATGAG CGCGGCCTCG GGTTCGTCGT CTGCCGCATC GTCGGCCGCG
CTGGCCGCGG CCTGA
 
Protein sequence
MAVQNPFFGK REPDTFQSRQ PSSALGGTTT TASTPTAAPA TRAAVSTASS ATAEGSGSKL 
TVGPNIKLKG VEITDCDTLV VEGTVEATMD SRVIQITEQG AFRGSAEIDI AEIHGEFDGT
LTVRQKLVIF STGKVSGKIR YGKVVIEEGG QLSGEIEVGL GGGARMSAAS GSSSAASSAA
LAAA